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NC_055716.1__YP_010089692.1__KNT60_gp112__00112

Bact-Vir

NC_055716.1__YP_010089692.1__KNT60_gp112__00112

Identity

Accession:
NC_055716 ↗
Kingdom:
phage

Quality

90.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-133
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23772.2 best Phage_g100 64.6 2.30e-17 76.6% 96.2%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 4.28e-01 90.6% 83.9%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 29.0 3.79e-01 83.6% 98.5%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 40.0 3.68e-01 81.2% 64.6%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3274239 330.1.1.18 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.56 37.0 3.94e-01 95.3% 74.8%
4593266 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.52 30.0 3.67e-01 80.5% 94.7%