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NC_055716.1__YP_010089724.1__KNT60_gp144__00144
Bact-VirNC_055716.1__YP_010089724.1__KNT60_gp144__00144
Identity
- Accession:
- NC_055716 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tegunavirus›
Yersinia_phage_fHe-Yen9-01
TaxID: 1965363
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-89
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zyiA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 35.0 | 2.71e-01 | 94.2% | 20.7% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 41.0 | 3.29e-01 | 94.2% | 37.3% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 3.89e-01 | 94.2% | 97.8% |
| 3u7vA02 | 2.60.220.20 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus | 0.52 | 45.0 | 3.31e-01 | 98.1% | 70.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3425671 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.56 | 46.0 | 3.77e-01 | 94.2% | 83.0% |
| 3646350 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 45.0 | 3.31e-01 | 94.2% | 42.6% |
| 3841203 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.53 | 42.0 | 2.57e-01 | 100.0% | 85.2% |
| 3560023 | 11.1.1.640 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ZP-N | 0.53 | 44.0 | 3.65e-01 | 100.0% | 50.0% |
| 3256938 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 44.0 | 3.47e-01 | 94.2% | 95.5% |
| 3519884 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 44.0 | 3.64e-01 | 100.0% | 52.0% |
| 3500328 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.51 | 38.0 | 2.47e-01 | 82.7% | 94.3% |