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NC_055716.1__YP_010089817.1__KNT60_gp237__00237

Bact-Vir

NC_055716.1__YP_010089817.1__KNT60_gp237__00237

Identity

Accession:
NC_055716 ↗
Kingdom:
phage

Quality

77.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Tegunavirus› Yersinia_phage_fHe-Yen9-01

TaxID: 1965363

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-68
PDB
Domain cluster: representative
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.82 72.0 6.09e-01 97.9% 61.5%
3nuhB03 3.10.20.690 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.77 67.0 5.50e-01 100.0% 56.2%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.72 60.0 5.27e-01 97.9% 64.9%
8c46A01 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 60.0 4.69e-01 100.0% 47.4%
2qdfA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.72 62.0 5.25e-01 100.0% 60.2%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 49.0 4.45e-01 79.2% 53.8%
3racA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.71 61.0 3.68e-01 100.0% 60.2%
1vzyA01 3.55.30.10 Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain 0.71 56.0 3.65e-01 93.8% 36.8%
3og5A01 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.70 58.0 4.98e-01 100.0% 61.2%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.70 55.0 4.03e-01 95.8% 29.9%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 57.0 4.45e-01 100.0% 47.3%
1cx8A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.68 58.0 3.58e-01 100.0% 17.9%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.24e-01 100.0% 39.7%
4pxdA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.30e-01 100.0% 59.1%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.67 53.0 4.49e-01 93.8% 55.1%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.66 57.0 3.54e-01 100.0% 19.3%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.65 52.0 4.41e-01 97.9% 60.4%
2khdA00 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 51.0 4.12e-01 100.0% 42.6%
2x8xX02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.64 51.0 4.62e-01 100.0% 67.1%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 47.0 3.08e-01 81.2% 85.3%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 43.0 3.15e-01 81.2% 23.5%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 42.0 3.24e-01 70.8% 39.6%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.63 47.0 3.09e-01 83.3% 86.5%
6wimA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.63 49.0 4.42e-01 93.8% 64.9%
2xefA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.63 55.0 3.34e-01 100.0% 30.9%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.62 49.0 3.81e-01 95.8% 62.4%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.61 49.0 3.20e-01 95.8% 38.9%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.61 46.0 3.31e-01 91.7% 69.0%
2abyA00 3.30.70.1980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 0.61 50.0 3.83e-01 95.8% 38.5%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.60 47.0 3.23e-01 91.7% 86.7%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.60 52.0 4.12e-01 100.0% 50.0%
3b8pA00 3.30.1890.10 Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like 0.59 49.0 3.23e-01 93.8% 35.7%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.59 45.0 2.94e-01 89.6% 42.4%
3viqA00 6.10.140.1020 Special › Helix non-globular › Helix Hairpins › 0.59 44.0 3.38e-01 85.4% 55.7%
2a74A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.59 42.0 3.29e-01 77.1% 59.0%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.58 48.0 3.57e-01 97.9% 47.9%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 41.0 3.76e-01 77.1% 60.0%
5fl7G02 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.58 48.0 3.20e-01 93.8% 38.1%
7f79A01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.58 46.0 3.27e-01 91.7% 42.8%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 3.41e-01 85.4% 38.2%
8dbsG01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.58 47.0 3.13e-01 91.7% 45.4%
6canA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 50.0 3.09e-01 100.0% 94.0%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.58 50.0 3.47e-01 100.0% 72.7%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.58 44.0 2.81e-01 87.5% 36.1%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.58 47.0 3.26e-01 93.8% 66.9%
3fvyA03 3.30.70.2600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 3.92e-01 87.5% 57.3%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.57 45.0 3.72e-01 100.0% 44.8%
1ii2B01 3.40.449.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphoenolpyruvate Carboxykinase; domain 1 › Phosphoenolpyruvate Carboxykinase, domain 1 0.57 46.0 3.16e-01 91.7% 62.4%
1p1hB01 3.30.2360.10 Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain 0.56 46.0 3.16e-01 91.7% 53.4%
1fs0G01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.56 45.0 3.45e-01 95.8% 63.8%
5xc5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 3.28e-01 100.0% 94.0%
3hvnA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.56 48.0 4.67e-01 97.9% 90.6%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.56 46.0 3.20e-01 100.0% 87.8%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 48.0 3.16e-01 97.9% 53.4%
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.55 47.0 4.18e-01 97.9% 66.2%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 40.0 3.16e-01 87.5% 32.8%
2bf1A00 2.170.40.20 Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein 0.55 46.0 2.85e-01 97.9% 47.4%
7n7zA01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.54 46.0 3.38e-01 100.0% 38.0%
7l1rG01 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.54 43.0 2.91e-01 95.8% 47.0%
7wu7501 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 38.0 2.98e-01 79.2% 82.5%
1g9mG00 2.170.40.20 Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein 0.54 44.0 2.82e-01 97.9% 32.8%
5n6lA01 3.60.110.10 Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase 0.54 46.0 2.91e-01 100.0% 50.2%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.25e-01 93.8% 84.6%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 42.0 2.81e-01 89.6% 45.9%
5dn6G02 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.54 42.0 2.93e-01 95.8% 48.5%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.28e-01 100.0% 55.8%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 44.0 3.50e-01 95.8% 53.8%
6cxhA03 2.60.40.1580 Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 0.52 43.0 3.26e-01 100.0% 64.7%
2f7sA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.01e-01 100.0% 88.8%
4mpoB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 37.0 2.74e-01 83.3% 87.8%
3klqA01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.26e-01 100.0% 95.8%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.51 42.0 2.83e-01 95.8% 46.6%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 35.0 2.76e-01 77.1% 57.9%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.50 34.0 3.03e-01 70.8% 56.0%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2547933 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.82 73.0 6.00e-01 100.0% 58.8%
4348096 3675.1.1.1 ↗ a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert 0.80 68.0 4.74e-01 100.0% 30.9%
4115098 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.76 65.0 5.45e-01 100.0% 64.7%
4016271 246.3.1.0 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like 0.76 61.0 5.14e-01 100.0% 51.1%
4397425 2008.1.1.6 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 0.73 57.0 4.35e-01 85.4% 100.0%
4887533 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.73 60.0 4.76e-01 95.8% 76.9%
3395022 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.71 53.0 4.63e-01 81.2% 53.4%
4881206 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.71 60.0 5.08e-01 100.0% 57.6%
5033074 1036.1.1.1 ↗ a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.71 59.0 4.57e-01 95.8% 48.2%
4898995 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.70 59.0 4.93e-01 100.0% 53.3%
3664523 304.55.1.15 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N 0.69 54.0 4.31e-01 91.7% 42.6%
3389626 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.68 54.0 4.78e-01 93.8% 61.3%
3517620 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.66 53.0 3.24e-01 89.6% 55.3%
3303720 3336.1.1.1 ↗ alpha complex topology › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › PRONE 0.66 48.0 2.83e-01 75.0% 62.3%
3943661 304.5.1.13 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 0.66 49.0 3.89e-01 81.2% 64.0%
3194847 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.66 51.0 2.88e-01 87.5% 13.3%
3492699 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 56.0 4.55e-01 100.0% 92.6%
4399128 7581.1.1.30 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt, Thiolase_C 0.65 49.0 2.89e-01 87.5% 10.5%
3224634 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.65 54.0 3.24e-01 95.8% 54.6%
3479321 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.65 47.0 2.79e-01 79.2% 12.7%
3647962 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.64 53.0 3.89e-01 97.9% 50.3%
3827180 2484.1.1.110 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE 0.63 49.0 3.45e-01 89.6% 64.2%
3960213 304.156.1.5 ↗ a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain › PF31086 0.63 46.0 3.69e-01 100.0% 35.7%
3684953 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.63 53.0 3.18e-01 97.9% 26.2%
5043596 304.15.1.0 ↗ a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.63 50.0 4.03e-01 100.0% 44.3%
3993311 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.63 50.0 3.70e-01 91.7% 36.3%
3193113 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.62 44.0 2.60e-01 81.2% 45.9%
3194238 2006.1.4.10 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 0.62 48.0 3.11e-01 89.6% 44.1%
3218266 5001.1.1.41 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.62 51.0 3.11e-01 95.8% 57.2%
3589882 4325.1.1.7 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.62 40.0 4.03e-01 85.4% 64.0%
3238364 109.4.1.32 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.62 45.0 2.71e-01 79.2% 24.3%
3391149 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.62 42.0 2.52e-01 70.8% 52.1%
3490141 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.61 50.0 3.68e-01 95.8% 50.3%
3709549 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.61 51.0 3.59e-01 95.8% 48.5%
3723832 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.60 52.0 3.18e-01 100.0% 61.2%
3450430 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 51.0 3.54e-01 97.9% 49.7%
5082551 7581.1.1.0 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.60 51.0 3.71e-01 97.9% 35.6%
4595166 5076.2.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ 0.60 46.0 3.08e-01 89.6% 25.3%
5002718 223.1.1.13 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.60 49.0 3.58e-01 95.8% 33.1%
3891434 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.59 48.0 3.61e-01 97.9% 52.1%
3743393 59.1.4.2 ↗ beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.59 49.0 2.89e-01 93.8% 46.3%
3634173 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.59 49.0 3.48e-01 95.8% 59.4%
3818469 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.59 47.0 3.53e-01 89.6% 88.8%
3389084 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.58 41.0 2.54e-01 77.1% 50.3%
2718723 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.58 48.0 4.30e-01 97.9% 66.7%
4930399 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 50.0 3.52e-01 100.0% 39.4%
4809699 3781.1.1.1 ↗ a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N 0.58 44.0 4.15e-01 95.8% 67.7%
5010647 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.57 48.0 3.13e-01 95.8% 67.6%
3818311 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.57 49.0 3.44e-01 97.9% 29.4%
4882106 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.57 43.0 3.66e-01 93.8% 47.5%
4169399 304.14.1.1 ↗ a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.56 48.0 4.09e-01 95.8% 70.9%
3347601 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.56 47.0 3.36e-01 95.8% 29.7%
5056444 2002.1.1.29 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.56 46.0 2.81e-01 93.8% 46.4%
4433789 2004.1.1.14 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.56 43.0 2.67e-01 85.4% 16.8%
3913149 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.56 45.0 3.18e-01 95.8% 28.7%
3906518 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 3.41e-01 100.0% 56.3%
2035523 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.55 41.0 3.24e-01 85.4% 42.0%
3973927 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.55 40.0 3.18e-01 87.5% 76.8%
3697137 5050.1.1.1 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.54 43.0 2.87e-01 95.8% 58.9%
4682251 2007.1.3.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.54 42.0 2.59e-01 100.0% 24.0%
3727442 101.1.2.569 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28722 0.54 44.0 3.28e-01 91.7% 79.2%
3729338 5051.1.1.10 ↗ alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.54 47.0 2.69e-01 100.0% 20.8%
4112438 223.1.1.111 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS, PAS_9 0.54 43.0 2.81e-01 100.0% 37.0%
3506686 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.53 43.0 2.90e-01 97.9% 92.3%
4968256 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 43.0 3.26e-01 100.0% 76.3%
None — 0.53 45.0 3.38e-01 100.0% 59.2%
3523834 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.53 47.0 2.77e-01 100.0% 31.0%
3738674 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.53 45.0 3.40e-01 93.8% 92.7%
4890002 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 41.0 2.95e-01 91.7% 41.9%
3604748 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 2.74e-01 93.8% 78.1%
3940439 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 45.0 2.65e-01 95.8% 96.6%
3469919 230.2.1.1 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C 0.51 43.0 3.79e-01 100.0% 77.3%
418498 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.51 39.0 2.94e-01 97.9% 51.3%
3211111 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.50 41.0 2.52e-01 100.0% 49.3%
3229770 70.3.1.13 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET_TTL 0.50 40.0 2.76e-01 100.0% 47.1%