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NC_055728.1__YP_010092161.1__KNT72_gp010__00010
Bact-VirNC_055728.1__YP_010092161.1__KNT72_gp010__00010
Identity
- Accession:
- NC_055728 ↗
- Kingdom:
- phage
Quality
91.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Winklervirus›
Serratia_phage_X20
TaxID: 2006942
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-86
Domain cluster:
rep: MW239124.1__QQG32192.1__CkP1_0225__00225__D6-80
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 38.0 | 4.59e-01 | 100.0% | 91.3% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 45.0 | 5.24e-01 | 100.0% | 100.0% |
| 2i0nA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 39.0 | 4.31e-01 | 100.0% | 96.5% |
| 3e1tA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 47.0 | 3.33e-01 | 96.2% | 51.0% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 40.0 | 4.22e-01 | 76.9% | 98.6% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.61e-01 | 79.5% | 73.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4253206 | 4.1.1.127 ↗ | beta barrels › SH3 › SH3 › SH3 › DtxR | 0.67 | 51.0 | 4.95e-01 | 100.0% | 72.2% |
| 4025709 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.66 | 29.0 | 3.17e-01 | 83.3% | 46.2% |
| 3962216 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 38.0 | 3.18e-01 | 74.4% | 58.6% |
| 4172782 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.52 | 37.0 | 3.12e-01 | 75.6% | 70.7% |
| 3740888 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.51 | 38.0 | 3.10e-01 | 80.8% | 84.4% |
| 4498288 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.51 | 38.0 | 3.00e-01 | 80.8% | 90.9% |
| 3175088 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.51 | 38.0 | 3.05e-01 | 82.1% | 84.8% |