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NC_055737.1__YP_010093657.1__KNT81_gp120__00120
Bact-VirNC_055737.1__YP_010093657.1__KNT81_gp120__00120
Identity
- Accession:
- NC_055737 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Bragavirus›
Proteus_phage_phiP4-3
TaxID: 2065203
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-85_246-334
Domain cluster:
rep: ALT_09252017_20_scaffold_47_prodigal-single.1__X__X__00239__D27-94_369-402_628-662
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09215.17 best | Phage-Gp8 | 110.3 | 1.50e-31 | 59.1% | 26.1% |
| PF09215.17 | Phage-Gp8 | 88.8 | 5.30e-25 | 43.5% | 19.3% |
D2
high
residues 86-243
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09215.17 best | Phage-Gp8 | 215.8 | 1.20e-63 | 100.0% | 49.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n7zA02 | 2.170.290.10 | Mainly Beta › Beta Complex › baseplate structural protein gp8, domain 2 › baseplate structural protein gp8, domain 2 | 0.96 | 92.0 | 9.29e-01 | 99.4% | 98.1% |
| 3rfoA02 | 3.10.25.10 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain | 0.50 | 30.0 | 3.48e-01 | 88.0% | 85.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2502874 | 4.30.1.1 ↗ | beta barrels › SH3 › Insertion domain of baseplate gp8 › Insertion domain of baseplate gp8 › Phage-Gp8 | 0.97 | 69.0 | 8.20e-01 | 73.4% | 100.0% |
| 4415867 | 270.1.1.2 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C | 0.52 | 31.0 | 3.68e-01 | 89.2% | 85.5% |