Back to structures

NC_055737.1__YP_010093657.1__KNT81_gp120__00120

Bact-Vir

NC_055737.1__YP_010093657.1__KNT81_gp120__00120

Identity

Accession:
NC_055737 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-85_246-334
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF09215.17 best Phage-Gp8 110.3 1.50e-31 59.1% 26.1%
PF09215.17 Phage-Gp8 88.8 5.30e-25 43.5% 19.3%
D2 high residues 86-243
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09215.17 best Phage-Gp8 215.8 1.20e-63 100.0% 49.5%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n7zA02 2.170.290.10 Mainly Beta › Beta Complex › baseplate structural protein gp8, domain 2 › baseplate structural protein gp8, domain 2 0.96 92.0 9.29e-01 99.4% 98.1%
3rfoA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.50 30.0 3.48e-01 88.0% 85.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2502874 4.30.1.1 beta barrels › SH3 › Insertion domain of baseplate gp8 › Insertion domain of baseplate gp8 › Phage-Gp8 0.97 69.0 8.20e-01 73.4% 100.0%
4415867 270.1.1.2 beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.52 31.0 3.68e-01 89.2% 85.5%