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NC_055743.1__YP_010095058.1__KNT87_gp111__00111
Bact-VirNC_055743.1__YP_010095058.1__KNT87_gp111__00111
Identity
- Accession:
- NC_055743 ↗
- Kingdom:
- phage
Quality
67.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Risoevirus›
Erwinia_phage_Cronus
TaxID: 2163633
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-136
Domain cluster:
rep: NC_028857.1__YP_009203845.1__CPT_Merlin131__00131__DFULL
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26834.1 best | Phage_T4_Y06J | 108.5 | 2.40e-31 | 78.3% | 65.7% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 41.0 | 4.67e-01 | 70.7% | 76.1% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 43.0 | 5.08e-01 | 70.7% | 90.3% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 44.0 | 4.61e-01 | 85.9% | 75.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 40.0 | 4.45e-01 | 71.7% | 81.7% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 41.0 | 4.46e-01 | 71.7% | 83.8% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 43.0 | 4.45e-01 | 87.0% | 77.6% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.62 | 42.0 | 4.39e-01 | 70.7% | 83.7% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 40.0 | 3.59e-01 | 73.9% | 47.3% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.44e-01 | 82.6% | 79.1% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 41.0 | 3.55e-01 | 81.5% | 47.5% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 3.32e-01 | 70.7% | 50.4% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 41.0 | 4.29e-01 | 83.7% | 86.0% |
| 1vwxZ00 | 2.30.30.770 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 46.0 | 4.05e-01 | 91.3% | 80.0% |
| 6e55A01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.52 | 37.0 | 4.00e-01 | 73.9% | 100.0% |
| 1ne3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 28.0 | 3.19e-01 | 100.0% | 70.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4121981 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.75 | 46.0 | 4.15e-01 | 70.7% | 46.4% |
| 4004283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 50.0 | 5.65e-01 | 79.3% | 95.7% |
| 5036498 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.71 | 44.0 | 4.79e-01 | 71.7% | 76.0% |
| 164934 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.71 | 41.0 | 4.67e-01 | 70.7% | 76.1% |
| 1394554 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 43.0 | 5.01e-01 | 70.7% | 87.5% |
| 3222146 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 43.0 | 5.03e-01 | 73.9% | 87.7% |
| 3756428 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.70 | 42.0 | 4.08e-01 | 70.7% | 55.0% |
| 3885050 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.70 | 42.0 | 3.35e-01 | 70.7% | 31.4% |
| 4200330 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.70 | 42.0 | 3.80e-01 | 70.7% | 44.8% |
| 4547820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 42.0 | 4.04e-01 | 73.9% | 54.3% |
| 3366578 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.69 | 42.0 | 3.86e-01 | 70.7% | 47.5% |
| 4210436 | 7090.1.1.1 ↗ | extended segments › Glycyl radical domain › Glycyl radical domain › Glycyl radical domain › Gly_radical | 0.68 | 48.0 | 4.31e-01 | 79.3% | 53.6% |
| 3651964 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.68 | 42.0 | 3.85e-01 | 70.7% | 47.5% |
| 3555930 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.68 | 42.0 | 4.70e-01 | 73.9% | 81.4% |
| 3415020 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.67 | 41.0 | 4.43e-01 | 73.9% | 71.2% |
| 3580609 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.67 | 41.0 | 4.82e-01 | 73.9% | 89.1% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.66 | 43.0 | 4.90e-01 | 73.9% | 88.6% |
| 3198731 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.65 | 45.0 | 4.01e-01 | 72.8% | 80.0% |
| 4261791 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.64 | 44.0 | 3.78e-01 | 87.0% | 44.8% |
| 4354770 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.62 | 39.0 | 4.43e-01 | 73.9% | 84.3% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 44.0 | 3.69e-01 | 100.0% | 44.5% |
| 4215717 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.44e-01 | 71.7% | 87.0% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.61 | 44.0 | 4.08e-01 | 75.0% | 98.3% |
| 4002679 | 4.1.1.322 ↗ | beta barrels › SH3 › SH3 › SH3 › GPKOW_C | 0.61 | 42.0 | 3.88e-01 | 71.7% | 61.7% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 43.0 | 3.79e-01 | 72.8% | 83.1% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.61 | 39.0 | 4.35e-01 | 71.7% | 85.7% |
| 3598499 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 3.61e-01 | 71.7% | 62.1% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.58 | 41.0 | 3.93e-01 | 75.0% | 96.3% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.57 | 47.0 | 4.62e-01 | 98.9% | 83.0% |
| 5054535 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.57 | 37.0 | 3.53e-01 | 70.7% | 55.5% |
| 3408330 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.04e-01 | 89.1% | 70.0% |
| 5028926 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.57 | 37.0 | 3.20e-01 | 70.7% | 43.6% |
| 4854141 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.56 | 36.0 | 3.26e-01 | 70.7% | 46.9% |
| 3302816 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.56 | 40.0 | 3.59e-01 | 75.0% | 94.6% |
| 3710582 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 49.0 | 4.74e-01 | 98.9% | 86.7% |
| 4838858 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.55 | 45.0 | 4.03e-01 | 91.3% | 80.0% |
| 3488000 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.55 | 45.0 | 3.93e-01 | 91.3% | 75.5% |
| 3504709 | 4.1.1.4 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e | 0.54 | 44.0 | 3.96e-01 | 91.3% | 76.3% |
| 2106292 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.54 | 45.0 | 3.98e-01 | 91.3% | 75.6% |
| 3597659 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 44.0 | 3.98e-01 | 91.3% | 76.1% |
| 3714873 | 4.1.1.4 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e | 0.54 | 45.0 | 3.83e-01 | 91.3% | 70.7% |
| 1421013 | 4.1.1.22 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e | 0.54 | 45.0 | 3.95e-01 | 92.4% | 72.1% |
| 3202614 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.52 | 36.0 | 2.47e-01 | 72.8% | 35.4% |