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NC_055758.1__YP_010097456.1__KNU02_gp62__00062

Bact-Vir

NC_055758.1__YP_010097456.1__KNU02_gp62__00062

Identity

Accession:
NC_055758 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-107
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02467.22 best Whib 30.8 5.00e-07 61.5% 53.8%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 36.0 3.01e-01 78.1% 34.5%
1xtfA00 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.55 48.0 3.21e-01 100.0% 59.5%
1oxjA02 1.25.40.170 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain 0.54 38.0 3.64e-01 81.2% 63.3%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.54 39.0 3.77e-01 77.1% 91.2%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3027027 1022.2.1.1 alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib 0.76 59.0 6.29e-01 92.7% 92.9%
3429029 611.3.1.17 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › TELO2_ARM 0.55 39.0 3.32e-01 74.0% 60.6%
3961048 4953.1.1.7 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › AI-2E_transport 0.54 35.0 3.58e-01 93.8% 67.8%