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NC_055761.1__YP_010097862.1__KNU05_gp159__00159
Bact-VirNC_055761.1__YP_010097862.1__KNU05_gp159__00159
Identity
- Accession:
- NC_055761 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Makelovirus›
Synechococcus_virus_S-PRM1
TaxID: 2100130
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-119
Domain cluster:
rep: MT708547.1__QOE32398.1__CPT_Muenster_226__00226__D3-86
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.61 | 30.0 | 3.41e-01 | 81.4% | 59.3% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.60 | 37.0 | 4.36e-01 | 99.2% | 88.9% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 39.0 | 4.05e-01 | 100.0% | 75.9% |
| 1gkuB07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.52 | 33.0 | 3.54e-01 | 93.2% | 74.5% |
| 1ksiA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 29.0 | 3.24e-01 | 98.3% | 70.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 59.0 | 6.53e-01 | 100.0% | 89.5% |
| 3548272 | 5089.1.1.3 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Gasdermin | 0.53 | 37.0 | 2.91e-01 | 71.2% | 79.5% |
| 3595300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 38.0 | 4.17e-01 | 99.2% | 91.6% |
| 4019699 | 2.1.1.128 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arb1 | 0.52 | 39.0 | 3.98e-01 | 92.4% | 80.9% |
| 3998850 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 38.0 | 3.91e-01 | 99.2% | 82.7% |
| 3939988 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 36.0 | 3.60e-01 | 95.8% | 70.4% |
| 3927128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.87e-01 | 96.6% | 79.2% |