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NC_055770.1__YP_010098882.1__KNU14_gp88__00088
Bact-VirNC_055770.1__YP_010098882.1__KNU14_gp88__00088
Identity
- Accession:
- NC_055770 ↗
- Kingdom:
- phage
Quality
72.8
mean pLDDT
Taxonomy
TaxID: 2315529
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-136
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.62 | 34.0 | 4.07e-01 | 86.5% | 81.8% |
| 3o2iA00 | 3.30.70.2710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 41.0 | 4.33e-01 | 72.1% | 76.3% |
| 1j0hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 32.0 | 3.47e-01 | 100.0% | 68.7% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 33.0 | 3.49e-01 | 82.7% | 65.6% |
| 4qn0B00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.55 | 43.0 | 3.34e-01 | 85.6% | 63.6% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 42.0 | 3.05e-01 | 82.7% | 50.5% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.91e-01 | 82.7% | 81.8% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.52 | 40.0 | 3.59e-01 | 83.7% | 70.8% |
| 3natA01 | 3.40.50.11250 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 | 0.52 | 42.0 | 3.74e-01 | 87.5% | 84.4% |
| 2jxpA01 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.51 | 42.0 | 3.84e-01 | 90.4% | 98.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4373611 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.58 | 42.0 | 3.57e-01 | 76.0% | 84.6% |
| 3449246 | 5.1.3.54 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 | 0.58 | 40.0 | 3.26e-01 | 72.1% | 71.2% |
| 3787279 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.56 | 40.0 | 2.94e-01 | 74.0% | 34.6% |
| 5030621 | 241.9.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 | 0.56 | 41.0 | 4.02e-01 | 76.0% | 98.2% |
| 2033779 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.55 | 34.0 | 3.20e-01 | 91.3% | 50.4% |
| 3232476 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 33.0 | 3.40e-01 | 81.7% | 62.0% |
| 3974914 | 7089.1.1.4 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › FlgI | 0.54 | 37.0 | 3.64e-01 | 76.9% | 64.3% |
| 3497908 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.54 | 43.0 | 2.61e-01 | 90.4% | 21.4% |
| 4969760 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.53 | 38.0 | 3.59e-01 | 75.0% | 85.4% |
| 4939324 | 5.1.4.559 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_propel | 0.53 | 41.0 | 2.89e-01 | 83.7% | 73.4% |
| 4433752 | 5.1.3.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neuraminidase | 0.52 | 42.0 | 3.15e-01 | 88.5% | 44.0% |
| 4021757 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 41.0 | 2.88e-01 | 88.5% | 54.6% |
| 3731706 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.51 | 40.0 | 2.78e-01 | 87.5% | 56.8% |
| 3282883 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.51 | 42.0 | 3.12e-01 | 91.3% | 73.9% |
| 3648159 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 33.0 | 3.06e-01 | 84.6% | 51.5% |
| 3264178 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 32.0 | 2.95e-01 | 82.7% | 47.9% |