Back to structures

NC_055807.1__YP_010103272.1__KNU65_gp66__00072

Bact-Vir

NC_055807.1__YP_010103272.1__KNU65_gp66__00072

Identity

Accession:
NC_055807 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-71
PDB
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.80 50.0 4.52e-01 100.0% 47.7%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.79 51.0 4.34e-01 100.0% 42.7%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 49.0 4.24e-01 100.0% 44.6%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.74 51.0 4.55e-01 100.0% 50.5%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.73 48.0 4.31e-01 100.0% 48.9%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 49.0 4.66e-01 100.0% 60.3%
4fomA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 47.0 4.06e-01 100.0% 44.4%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 45.0 4.20e-01 100.0% 51.9%
2di8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 48.0 4.24e-01 100.0% 50.0%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.69 50.0 3.94e-01 100.0% 37.2%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 53.0 4.37e-01 100.0% 48.3%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 51.0 4.37e-01 100.0% 50.5%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.64 45.0 3.65e-01 100.0% 35.9%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 42.0 4.26e-01 97.0% 67.2%
1vr4E00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.63 54.0 4.88e-01 100.0% 76.3%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.62 50.0 4.24e-01 100.0% 53.7%
4g2uA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.62 53.0 3.81e-01 100.0% 39.5%
2f4lA03 3.10.28.20 Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains 0.62 52.0 4.97e-01 100.0% 81.2%
2x1wL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 4.08e-01 100.0% 52.4%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.62 48.0 3.33e-01 100.0% 25.9%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 46.0 4.05e-01 100.0% 53.5%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 46.0 4.15e-01 100.0% 59.6%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 43.0 3.85e-01 100.0% 53.3%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.61 53.0 4.40e-01 100.0% 55.1%
1ej6A02 3.55.60.10 Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components 0.60 44.0 3.49e-01 100.0% 35.8%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 48.0 3.94e-01 90.9% 81.4%
3qkbA00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.59 52.0 4.66e-01 100.0% 74.5%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 38.0 3.12e-01 100.0% 33.6%
4czwA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 43.0 2.68e-01 77.3% 74.2%
4k59A00 2.60.40.4380 Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA 0.59 45.0 4.55e-01 100.0% 83.3%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.10e-01 100.0% 55.1%
2bjnB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.59 47.0 3.65e-01 100.0% 39.2%
4jb9H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 4.12e-01 100.0% 57.3%
4fprB00 3.30.70.2910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 51.0 4.14e-01 100.0% 54.7%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 51.0 3.73e-01 100.0% 46.2%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.58 41.0 3.88e-01 100.0% 62.2%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.57 41.0 3.20e-01 100.0% 33.1%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.57 41.0 3.86e-01 100.0% 61.6%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.56 42.0 4.19e-01 81.8% 86.8%
4dmzA02 3.30.70.2880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 39.0 3.12e-01 74.2% 52.6%
3ewkA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 51.0 4.27e-01 100.0% 97.2%
3i24B00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.55 47.0 3.79e-01 100.0% 47.5%
4ew7A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 50.0 4.14e-01 100.0% 81.4%
2anrA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 40.0 3.90e-01 100.0% 69.3%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 49.0 4.44e-01 100.0% 72.5%
2op5B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 45.0 3.99e-01 100.0% 62.0%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.68e-01 100.0% 51.8%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.67e-01 100.0% 57.1%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.54 45.0 4.08e-01 100.0% 66.0%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 44.0 3.43e-01 100.0% 41.1%
5wpjA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.54 45.0 3.97e-01 100.0% 63.0%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 41.0 3.35e-01 100.0% 42.1%
5u1xA02 2.60.490.10 Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain 0.54 42.0 2.87e-01 92.4% 21.8%
1v4pC01 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.53 44.0 3.92e-01 100.0% 62.0%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.53 46.0 3.65e-01 100.0% 59.0%
4ndhB00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.53 46.0 3.44e-01 100.0% 38.8%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 37.0 3.01e-01 74.2% 90.8%
2vlgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 47.0 4.06e-01 100.0% 95.1%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.53 40.0 3.65e-01 84.8% 61.5%
5o6uB00 3.30.70.2540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 0.52 41.0 3.08e-01 100.0% 32.4%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.69e-01 100.0% 64.7%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 46.0 3.65e-01 100.0% 68.8%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.63e-01 100.0% 62.0%
3fmbA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.71e-01 100.0% 60.0%
7pwfD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.52 42.0 3.87e-01 90.9% 100.0%
1x8dA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.58e-01 100.0% 58.8%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.24e-01 100.0% 47.7%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.43e-01 100.0% 57.6%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 2.96e-01 100.0% 27.9%
4kp4A02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 46.0 3.51e-01 100.0% 48.6%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 46.0 4.03e-01 100.0% 97.0%
3jamD02 3.30.1140.32 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain 0.51 43.0 3.46e-01 95.5% 72.2%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 34.0 2.92e-01 100.0% 38.5%
2abyA00 3.30.70.1980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 0.51 42.0 3.46e-01 92.4% 73.8%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 2.99e-01 100.0% 31.8%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3914568 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.80 54.0 4.62e-01 100.0% 44.8%
4947046 882.1.1.0 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 0.79 59.0 4.44e-01 100.0% 34.7%
4943808 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.77 57.0 4.33e-01 100.0% 34.7%
4974604 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.76 53.0 4.25e-01 100.0% 38.4%
3847078 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.75 49.0 3.67e-01 100.0% 28.1%
4930968 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.74 52.0 4.02e-01 100.0% 34.3%
3889764 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.74 49.0 4.17e-01 100.0% 42.9%
4977616 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.74 55.0 4.43e-01 100.0% 41.6%
3919886 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 58.0 4.85e-01 100.0% 51.8%
5023895 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.72 53.0 4.14e-01 100.0% 36.6%
3762904 11.1.1.1356 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig, C2-set_2 0.71 53.0 3.51e-01 100.0% 20.0%
5079012 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.71 52.0 4.10e-01 100.0% 36.6%
3863526 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.70 52.0 4.31e-01 100.0% 45.2%
3412911 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.70 52.0 4.34e-01 100.0% 46.1%
3896642 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.70 49.0 3.31e-01 100.0% 20.0%
4960709 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.70 48.0 3.79e-01 100.0% 34.3%
3572486 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.70 52.0 4.33e-01 100.0% 46.1%
3893730 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.69 48.0 4.22e-01 100.0% 48.0%
3883932 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.69 47.0 4.07e-01 100.0% 44.8%
4243179 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.69 61.0 3.93e-01 100.0% 21.3%
3907806 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.69 51.0 4.27e-01 100.0% 46.1%
3998860 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.68 60.0 4.33e-01 100.0% 43.2%
5005033 304.39.1.0 a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.68 50.0 4.73e-01 100.0% 65.0%
3822140 387.1.5.7 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › SCRL 0.68 55.0 5.43e-01 100.0% 84.3%
4379320 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.67 42.0 3.65e-01 100.0% 40.0%
4982133 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.67 42.0 3.98e-01 100.0% 52.5%
5012996 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.65 57.0 4.80e-01 100.0% 57.5%
3165282 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.64 47.0 3.10e-01 100.0% 18.9%
3588078 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.64 55.0 5.06e-01 100.0% 74.4%
3693349 210.1.3.5 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.64 45.0 3.18e-01 100.0% 23.9%
3932886 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 50.0 4.51e-01 100.0% 61.1%
5061413 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 47.0 4.00e-01 100.0% 49.5%
4996918 3685.1.1.1 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA 0.63 54.0 5.09e-01 100.0% 80.0%
3540722 304.44.1.5 a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › JAG1 0.63 51.0 4.30e-01 100.0% 52.2%
5001095 3685.1.1.0 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain 0.63 54.0 4.84e-01 100.0% 68.1%
3875231 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.63 44.0 3.55e-01 100.0% 40.0%
1942474 3685.1.1.0 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain 0.62 53.0 5.04e-01 100.0% 81.2%
3210445 3685.1.1.1 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA 0.62 53.0 4.69e-01 100.0% 65.7%
4022825 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 48.0 4.19e-01 100.0% 54.3%
3690420 3685.1.1.1 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA 0.62 52.0 4.83e-01 100.0% 73.3%
3236767 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.61 53.0 4.76e-01 100.0% 69.5%
5065186 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 54.0 4.25e-01 100.0% 47.5%
4138721 101.1.9.20 alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 0.61 45.0 4.36e-01 100.0% 69.3%
3609886 304.47.1.0 a+b two layers › Alpha-beta plaits › SEA domain › SEA domain 0.61 51.0 4.58e-01 100.0% 68.0%
4959305 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 49.0 3.99e-01 100.0% 47.2%
3806772 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.60 49.0 4.99e-01 100.0% 96.9%
4169399 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.60 44.0 4.24e-01 100.0% 68.4%
4001852 273.1.1.0 a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.60 50.0 3.78e-01 98.5% 36.7%
3931530 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.60 48.0 4.11e-01 100.0% 52.5%
1274087 3685.1.1.0 a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain 0.59 51.0 4.72e-01 98.5% 79.1%
180088 872.3.1.0 a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like 0.59 50.0 4.60e-01 100.0% 75.8%
5066425 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.59 37.0 3.54e-01 100.0% 52.5%
3700379 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 52.0 3.96e-01 100.0% 58.2%
4959304 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 50.0 4.05e-01 100.0% 51.7%
3934872 3122.1.1.2 a+b complex topology › MESD › MESD › MESD › SCVP 0.57 48.0 4.18e-01 100.0% 60.0%
4233442 304.4.1.54 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless 0.57 43.0 3.74e-01 100.0% 49.2%
5035799 304.57.1.1 a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 0.57 47.0 4.01e-01 100.0% 54.0%
4958412 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.57 48.0 3.86e-01 100.0% 48.8%
3478433 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 4.03e-01 100.0% 55.4%
3183837 246.3.1.4 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 0.57 49.0 2.81e-01 100.0% 43.5%
984477 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.57 46.0 4.18e-01 100.0% 64.6%
5074889 878.1.1.1 a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 0.56 47.0 4.22e-01 98.5% 66.3%
1175570 101.1.2.17 alpha arrays › HTH › HTH › winged helix domain 0.56 50.0 4.03e-01 100.0% 52.4%
3707996 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.55 46.0 2.82e-01 100.0% 22.9%
3945562 1.1.7.111 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › T6SS_TssF 0.55 46.0 3.94e-01 98.5% 95.7%
4020817 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 46.0 3.99e-01 100.0% 59.1%
3686006 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 47.0 2.96e-01 100.0% 32.7%
3716228 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.54 41.0 3.25e-01 81.8% 85.0%
3719128 310.3.1.16 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF30974 0.53 45.0 3.98e-01 100.0% 86.7%
3995614 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 43.0 3.27e-01 100.0% 36.8%
5075567 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.52 45.0 3.87e-01 100.0% 64.5%
3220701 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.51 45.0 2.86e-01 100.0% 19.1%
1407174 4142.1.1.2 a+b two layers › YehR-like › YehR-like › YehR-like › SP_0191-like 0.51 41.0 3.40e-01 100.0% 45.7%
3987494 3636.1.1.0 a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.51 41.0 3.65e-01 95.5% 97.1%
3495780 304.107.1.5 a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BCS1_N 0.51 46.0 3.47e-01 100.0% 68.4%
3624994 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 44.0 2.86e-01 98.5% 29.8%
4192494 11.1.1.1357 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set, C2-set_2, Ig_3 0.50 43.0 2.80e-01 100.0% 21.3%