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NC_055816.1__YP_010104287.1__KNU74_gp73__00073
Bact-VirNC_055816.1__YP_010104287.1__KNU74_gp73__00073
Identity
- Accession:
- NC_055816 ↗
- Kingdom:
- phage
Quality
87.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stackebrandtviridae›
Wizardvirus›
Gordonia_phage_Fireball
TaxID: 2652412
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-60
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ogwA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.71 | 52.0 | 3.72e-01 | 77.4% | 36.5% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 47.0 | 4.71e-01 | 73.6% | 74.1% |
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.65 | 56.0 | 3.78e-01 | 98.1% | 26.9% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.65 | 53.0 | 3.43e-01 | 100.0% | 46.3% |
| 5b1aH00 | 1.10.10.140 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cytochrome c oxidase, subunit VIb | 0.62 | 44.0 | 3.84e-01 | 75.5% | 78.5% |
| 4k08A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 47.0 | 3.57e-01 | 88.7% | 46.5% |
| 1zx3A01 | 1.10.287.1020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like | 0.59 | 46.0 | 3.95e-01 | 84.9% | 56.5% |
| 7kznP01 | 3.30.740.10 | Alpha Beta › 2-Layer Sandwich › Protein Inhibitor Of Neuronal Nitric Oxide Synthase › Protein Inhibitor Of Neuronal Nitric Oxide Synthase; | 0.59 | 43.0 | 3.61e-01 | 77.4% | 59.1% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 48.0 | 3.66e-01 | 100.0% | 37.9% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.57 | 39.0 | 3.52e-01 | 71.7% | 97.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3236421 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.82 | 60.0 | 5.27e-01 | 77.4% | 54.7% |
| 3596199 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.78 | 59.0 | 4.33e-01 | 84.9% | 31.9% |
| 3486996 | 3730.1.1.0 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain | 0.76 | 53.0 | 5.27e-01 | 73.6% | 70.9% |
| 3693121 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.76 | 55.0 | 4.30e-01 | 77.4% | 38.2% |
| 4964776 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.73 | 52.0 | 3.25e-01 | 75.5% | 73.7% |
| 4378 | 4359.1.1.1 ↗ | alpha duplicates or obligate multimers › YfbU-like, N-terminal subdomain › YfbU-like, N-terminal subdomain › YfbU-like, N-terminal subdomain › YfbU | 0.69 | 47.0 | 4.68e-01 | 71.7% | 72.7% |
| 3623710 | 3277.2.1.1 ↗ | alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C | 0.63 | 48.0 | 3.91e-01 | 83.0% | 58.1% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.51 | 37.0 | 3.72e-01 | 94.3% | 81.8% |