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NC_055824.1__YP_010105092.1__KNU82_gp005__00005
Bact-VirNC_055824.1__YP_010105092.1__KNU82_gp005__00005
Identity
- Accession:
- NC_055824 ↗
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Penintadodekavirus›
Vibrio_phage_phi50-12
TaxID: 2654972
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-136
D2
high
residues 850-925
Domain cluster:
rep: MG592671.1__AUS02994.1__NVP2275O_413__00413__D565-647
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 67.0 | 5.75e-01 | 100.0% | 68.6% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.72 | 66.0 | 6.19e-01 | 100.0% | 84.6% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 38.0 | 3.31e-01 | 85.5% | 36.7% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.69 | 61.0 | 5.71e-01 | 100.0% | 93.5% |
| 1i8dA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 61.0 | 5.80e-01 | 100.0% | 84.3% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 60.0 | 5.61e-01 | 100.0% | 81.5% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 58.0 | 5.31e-01 | 100.0% | 86.7% |
| 1kzlA02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 60.0 | 5.49e-01 | 100.0% | 75.2% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.66 | 59.0 | 5.66e-01 | 100.0% | 88.5% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 59.0 | 5.61e-01 | 100.0% | 84.3% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 58.0 | 5.29e-01 | 100.0% | 81.7% |
| 1xweA01 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 47.0 | 3.79e-01 | 100.0% | 39.9% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 55.0 | 5.15e-01 | 94.7% | 86.5% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.65 | 52.0 | 4.20e-01 | 89.5% | 75.0% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 56.0 | 5.32e-01 | 100.0% | 87.9% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.64 | 49.0 | 4.02e-01 | 81.6% | 99.3% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 49.0 | 4.88e-01 | 84.2% | 86.1% |
| 5k3xA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 53.0 | 4.74e-01 | 98.7% | 91.2% |
| 4hikA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 52.0 | 4.27e-01 | 100.0% | 51.4% |
| 2dy1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 53.0 | 4.97e-01 | 100.0% | 83.5% |
| 4bfoA00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.61 | 52.0 | 4.75e-01 | 98.7% | 84.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 47.0 | 4.46e-01 | 84.2% | 74.4% |
| 3bpnC03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 53.0 | 4.87e-01 | 98.7% | 94.1% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 51.0 | 4.08e-01 | 97.4% | 89.2% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 47.0 | 4.28e-01 | 86.8% | 90.2% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 50.0 | 4.00e-01 | 94.7% | 96.1% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 48.0 | 3.99e-01 | 93.4% | 77.6% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.72e-01 | 96.1% | 95.6% |
| 1a6aB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.55e-01 | 96.1% | 90.8% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.58 | 46.0 | 3.76e-01 | 88.2% | 64.9% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.72e-01 | 97.4% | 95.5% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.58 | 43.0 | 4.06e-01 | 81.6% | 90.5% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.46e-01 | 97.4% | 89.4% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.57e-01 | 97.4% | 89.5% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.49e-01 | 84.2% | 94.5% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.43e-01 | 98.7% | 92.3% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.45e-01 | 97.4% | 88.0% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 4.59e-01 | 97.4% | 94.5% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.45e-01 | 100.0% | 88.0% |
| 3so5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 49.0 | 4.43e-01 | 100.0% | 89.5% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.56 | 48.0 | 3.23e-01 | 97.4% | 46.1% |
| 1p38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 3.58e-01 | 85.5% | 54.6% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 4.31e-01 | 97.4% | 95.0% |
| 1im3D00 | 2.60.40.1200 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 4.26e-01 | 96.1% | 90.5% |
| 2cwrA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 47.0 | 4.40e-01 | 98.7% | 88.7% |
| 1vs3A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.55 | 42.0 | 3.53e-01 | 86.8% | 69.4% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 45.0 | 4.27e-01 | 98.7% | 91.6% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 4.61e-01 | 97.4% | 96.2% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 47.0 | 4.05e-01 | 100.0% | 95.2% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 4.32e-01 | 100.0% | 90.7% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.16e-01 | 100.0% | 93.5% |
| 4rsvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.17e-01 | 96.1% | 88.9% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.48e-01 | 100.0% | 93.7% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 37.0 | 2.43e-01 | 75.0% | 17.1% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 39.0 | 2.74e-01 | 82.9% | 72.1% |
| 4iykA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.75e-01 | 97.4% | 93.2% |
| 4i9xA00 | 2.60.40.3790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.21e-01 | 96.1% | 63.6% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.78 | 71.0 | 6.14e-01 | 100.0% | 85.2% |
| 3187444 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.76 | 69.0 | 5.98e-01 | 100.0% | 88.7% |
| 4076380 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 47.0 | 5.25e-01 | 100.0% | 83.3% |
| 5065684 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 66.0 | 6.26e-01 | 100.0% | 95.6% |
| 3604862 | 7526.1.1.2 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › EF-G_D2 | 0.72 | 66.0 | 4.58e-01 | 100.0% | 31.7% |
| 140 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.72 | 66.0 | 6.19e-01 | 100.0% | 84.6% |
| 3712655 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.72 | 66.0 | 5.45e-01 | 100.0% | 58.5% |
| 4521547 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.72 | 61.0 | 5.84e-01 | 100.0% | 80.0% |
| 4395103 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 62.0 | 5.91e-01 | 100.0% | 81.1% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 64.0 | 6.09e-01 | 100.0% | 92.2% |
| 4083333 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.71 | 65.0 | 6.00e-01 | 100.0% | 81.1% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 64.0 | 5.92e-01 | 100.0% | 85.3% |
| 5001586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 63.0 | 6.02e-01 | 100.0% | 90.0% |
| 3963302 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.70 | 63.0 | 5.63e-01 | 100.0% | 83.8% |
| 3744064 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.70 | 62.0 | 5.93e-01 | 100.0% | 90.0% |
| 4405079 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.70 | 62.0 | 5.82e-01 | 100.0% | 80.0% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 61.0 | 5.80e-01 | 100.0% | 88.9% |
| 4062509 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.68 | 60.0 | 5.42e-01 | 100.0% | 87.6% |
| 5034906 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.67 | 58.0 | 4.67e-01 | 98.7% | 48.4% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.67 | 59.0 | 5.41e-01 | 100.0% | 93.0% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.66 | 58.0 | 5.53e-01 | 100.0% | 92.2% |
| 4969147 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 58.0 | 5.31e-01 | 98.7% | 91.0% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 58.0 | 5.55e-01 | 100.0% | 91.1% |
| 3845835 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.66 | 58.0 | 5.15e-01 | 100.0% | 70.0% |
| 2869319 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.65 | 56.0 | 5.21e-01 | 100.0% | 76.5% |
| 5059104 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 55.0 | 5.02e-01 | 97.4% | 90.5% |
| 3965956 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.65 | 56.0 | 5.33e-01 | 100.0% | 92.2% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.63 | 53.0 | 4.27e-01 | 94.7% | 74.8% |
| 5038369 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 55.0 | 5.05e-01 | 100.0% | 82.0% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.62 | 52.0 | 4.44e-01 | 94.7% | 86.2% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.62 | 53.0 | 4.66e-01 | 100.0% | 77.5% |
| 4946793 | 11.1.1.1392 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Metallophos | 0.61 | 52.0 | 4.61e-01 | 100.0% | 72.5% |
| 3321067 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 52.0 | 4.97e-01 | 100.0% | 82.2% |
| 4396419 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.61 | 53.0 | 3.92e-01 | 100.0% | 89.0% |
| 4946955 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.61 | 52.0 | 4.90e-01 | 98.7% | 92.6% |
| 4606765 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.60 | 51.0 | 4.62e-01 | 100.0% | 77.3% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.60 | 50.0 | 4.03e-01 | 94.7% | 76.1% |
| 3270782 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.60 | 50.0 | 4.85e-01 | 98.7% | 92.2% |
| 4980723 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 51.0 | 4.68e-01 | 98.7% | 88.6% |
| 4096792 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.60 | 49.0 | 3.70e-01 | 94.7% | 70.2% |
| 4969173 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 50.0 | 4.56e-01 | 96.1% | 88.6% |
| 3563581 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.59 | 51.0 | 4.62e-01 | 97.4% | 86.7% |
| 5030942 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.55e-01 | 98.7% | 69.0% |
| 3905413 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.58 | 50.0 | 4.54e-01 | 97.4% | 88.6% |
| 2491471 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 51.0 | 4.45e-01 | 100.0% | 76.3% |
| 5011987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 51.0 | 4.71e-01 | 100.0% | 79.6% |
| 5058955 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.37e-01 | 100.0% | 84.3% |
| 3903569 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.57 | 49.0 | 4.53e-01 | 97.4% | 89.0% |
| 3267168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.66e-01 | 100.0% | 84.2% |
| 3504691 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.57 | 49.0 | 4.48e-01 | 98.7% | 91.4% |
| 5069823 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 4.52e-01 | 97.4% | 87.0% |
| 5061387 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 50.0 | 4.53e-01 | 100.0% | 87.6% |
| 3854631 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.57 | 49.0 | 4.45e-01 | 98.7% | 91.4% |
| 3476721 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 47.0 | 4.44e-01 | 98.7% | 90.0% |
| 3941964 | 11.1.1.46 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N | 0.56 | 48.0 | 4.34e-01 | 100.0% | 88.2% |
| 1944061 | 11.1.1.279 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TarS_C1 | 0.56 | 49.0 | 4.06e-01 | 98.7% | 92.9% |
| 4409111 | 11.1.1.66 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG | 0.56 | 49.0 | 4.55e-01 | 100.0% | 94.9% |
| 5081968 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.43e-01 | 100.0% | 90.0% |
| 5058531 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 47.0 | 4.41e-01 | 100.0% | 88.0% |
| 5035871 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.56 | 47.0 | 4.43e-01 | 97.4% | 92.6% |
| 4258556 | 11.1.1.66 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG | 0.55 | 49.0 | 4.50e-01 | 100.0% | 95.0% |
| 3504690 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.55 | 47.0 | 4.22e-01 | 98.7% | 90.0% |
| 4616192 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.55 | 47.0 | 4.22e-01 | 100.0% | 82.6% |
| 5044479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 4.29e-01 | 100.0% | 90.5% |
| 3556565 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.55 | 46.0 | 4.20e-01 | 97.4% | 87.6% |
| 3547717 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.55 | 46.0 | 4.23e-01 | 96.1% | 87.6% |
| 3041546 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.54 | 47.0 | 4.25e-01 | 100.0% | 85.8% |
| 3938171 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.54 | 46.0 | 4.22e-01 | 98.7% | 92.4% |
| 3526577 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.54 | 45.0 | 3.88e-01 | 98.7% | 67.7% |
| 3921959 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.53 | 44.0 | 4.21e-01 | 97.4% | 88.4% |
| 3404910 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 45.0 | 3.96e-01 | 100.0% | 90.4% |
| 4857754 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 46.0 | 4.23e-01 | 100.0% | 91.3% |
| 3935337 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 44.0 | 4.21e-01 | 98.7% | 92.6% |
| 4972804 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.19e-01 | 97.4% | 86.0% |
| 2549615 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 44.0 | 4.16e-01 | 100.0% | 84.0% |
| 3912840 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 44.0 | 4.04e-01 | 98.7% | 87.6% |
| 3914060 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 43.0 | 4.08e-01 | 98.7% | 89.0% |
| 4931128 | 11.1.1.257 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Top6b_C | 0.52 | 45.0 | 3.95e-01 | 97.4% | 75.7% |
| 3932418 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 43.0 | 3.94e-01 | 96.1% | 91.4% |
| 3897495 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.78e-01 | 100.0% | 73.1% |
| 5013744 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 38.0 | 3.89e-01 | 82.9% | 94.7% |
| 3581781 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 42.0 | 4.01e-01 | 100.0% | 86.3% |
| 3935372 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 41.0 | 3.85e-01 | 98.7% | 81.9% |
D3
medium
residues 138-252
D4
medium
residues 253-356
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nqwA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 29.0 | 3.13e-01 | 88.5% | 58.6% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 26.0 | 3.36e-01 | 75.0% | 77.8% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.53 | 23.0 | 3.30e-01 | 81.7% | 89.1% |
| 2ya0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 33.0 | 3.11e-01 | 78.8% | 53.1% |
D5
medium
residues 367-437_468-603
Domain cluster:
rep: OR493421.1__WNY41174.1__X__00290__D315-474
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 57.0 | 5.58e-01 | 99.5% | 73.0% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.74 | 42.0 | 4.82e-01 | 93.2% | 73.4% |
| 3zppA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 5.23e-01 | 96.6% | 67.5% |
| 3jurA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 68.0 | 5.14e-01 | 98.1% | 59.5% |
| 6kqsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 66.0 | 5.06e-01 | 97.1% | 66.0% |
| 1bheA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 68.0 | 5.40e-01 | 100.0% | 57.4% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 5.29e-01 | 97.6% | 60.8% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 45.0 | 5.06e-01 | 97.6% | 84.1% |
| 7b7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 65.0 | 5.14e-01 | 99.5% | 53.6% |
| 2inuA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 65.0 | 5.07e-01 | 98.6% | 51.4% |
| 1k5cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 65.0 | 5.42e-01 | 100.0% | 73.9% |
| 1vblA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 65.0 | 5.02e-01 | 100.0% | 57.0% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 44.0 | 4.98e-01 | 97.6% | 84.7% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 64.0 | 5.15e-01 | 99.0% | 57.3% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 63.0 | 4.70e-01 | 99.0% | 44.1% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 63.0 | 4.49e-01 | 97.6% | 57.5% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 63.0 | 5.26e-01 | 100.0% | 71.3% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 62.0 | 4.80e-01 | 97.6% | 50.9% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 63.0 | 4.96e-01 | 99.5% | 58.2% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 62.0 | 4.90e-01 | 98.1% | 51.6% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 63.0 | 4.92e-01 | 98.6% | 62.3% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 62.0 | 5.30e-01 | 100.0% | 65.4% |
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 62.0 | 5.04e-01 | 100.0% | 59.3% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.63 | 59.0 | 5.70e-01 | 97.1% | 91.2% |
| 2yuhA01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 47.0 | 5.08e-01 | 89.4% | 93.0% |
| 2w7zA00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.60 | 46.0 | 4.70e-01 | 98.1% | 79.7% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 48.0 | 4.96e-01 | 96.6% | 99.5% |
| 3wl5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 3.63e-01 | 90.3% | 92.0% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032796 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.89 | 60.0 | 5.52e-01 | 98.1% | 55.3% |
| 4597622 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.86 | 66.0 | 5.76e-01 | 98.6% | 54.9% |
| 4945679 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.85 | 64.0 | 5.74e-01 | 98.6% | 58.9% |
| 5040393 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 65.0 | 6.17e-01 | 98.1% | 69.2% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 56.0 | 6.14e-01 | 95.7% | 83.4% |
| 4970242 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 61.0 | 5.83e-01 | 97.1% | 69.6% |
| 4970153 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.78 | 60.0 | 4.01e-01 | 97.6% | 23.5% |
| 4943541 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.77 | 62.0 | 5.24e-01 | 98.6% | 52.9% |
| 5049174 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.76 | 62.0 | 5.15e-01 | 98.6% | 52.6% |
| 5039543 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 64.0 | 5.02e-01 | 99.5% | 46.2% |
| 4973391 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 65.0 | 5.31e-01 | 98.6% | 53.8% |
| 5055582 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.75 | 61.0 | 5.51e-01 | 97.6% | 64.9% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 65.0 | 4.87e-01 | 97.6% | 41.5% |
| 5043031 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 68.0 | 5.96e-01 | 96.1% | 88.3% |
| 5019688 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 60.0 | 5.30e-01 | 98.6% | 61.8% |
| 4980562 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 61.0 | 4.95e-01 | 97.1% | 51.4% |
| 5040394 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.72 | 59.0 | 6.11e-01 | 100.0% | 88.9% |
| 5004184 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 67.0 | 5.53e-01 | 98.1% | 60.0% |
| 5033195 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.71 | 61.0 | 5.74e-01 | 97.6% | 75.0% |
| 2546335 | 207.2.1.32 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › CatAgl_D2 | 0.71 | 67.0 | 5.26e-01 | 99.5% | 62.7% |
| 5081707 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.71 | 61.0 | 5.20e-01 | 98.1% | 58.7% |
| 4578770 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.71 | 68.0 | 5.38e-01 | 100.0% | 54.5% |
| 377410 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.71 | 66.0 | 5.04e-01 | 98.6% | 59.6% |
| 4972671 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 62.0 | 5.11e-01 | 98.6% | 55.3% |
| 5017250 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.70 | 64.0 | 5.03e-01 | 98.1% | 50.8% |
| 3987209 | 207.2.1.21 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix | 0.70 | 66.0 | 4.91e-01 | 98.6% | 51.6% |
| 5040689 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.70 | 61.0 | 4.72e-01 | 97.6% | 45.4% |
| 3648137 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.70 | 66.0 | 5.24e-01 | 99.5% | 54.3% |
| 5078153 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.70 | 67.0 | 4.56e-01 | 100.0% | 55.0% |
| 3804805 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.70 | 65.0 | 5.08e-01 | 99.0% | 51.0% |
| 4977972 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 61.0 | 5.65e-01 | 97.6% | 74.5% |
| 5045771 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 62.0 | 5.13e-01 | 97.6% | 56.8% |
| 4981813 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.69 | 62.0 | 5.39e-01 | 97.6% | 65.9% |
| 4989914 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 60.0 | 4.72e-01 | 97.6% | 47.3% |
| 4955692 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 65.0 | 5.36e-01 | 98.6% | 67.9% |
| 4970380 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 61.0 | 5.17e-01 | 98.1% | 59.7% |
| 185865 | 207.2.1.28 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix_2 | 0.69 | 65.0 | 5.07e-01 | 98.6% | 51.4% |
| 5041560 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 61.0 | 4.70e-01 | 97.6% | 46.7% |
| 4969480 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 62.0 | 5.43e-01 | 99.0% | 67.7% |
| 3707216 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.68 | 41.0 | 4.04e-01 | 97.1% | 56.4% |
| 3455716 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.68 | 65.0 | 5.32e-01 | 99.5% | 59.1% |
| 5047513 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.68 | 63.0 | 4.65e-01 | 98.1% | 41.4% |
| 4944457 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.68 | 62.0 | 5.44e-01 | 98.1% | 67.9% |
| 3824788 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.67 | 63.0 | 5.18e-01 | 97.1% | 65.3% |
| 4970402 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 64.0 | 5.74e-01 | 98.6% | 81.0% |
| 4014339 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 61.0 | 5.31e-01 | 97.6% | 66.6% |
| 5061716 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.67 | 60.0 | 5.35e-01 | 96.6% | 68.6% |
| 4987748 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 57.0 | 5.82e-01 | 96.6% | 90.0% |
| 5022133 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.67 | 63.0 | 5.43e-01 | 98.1% | 67.0% |
| 5058698 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.67 | 63.0 | 5.14e-01 | 98.6% | 58.0% |
| 3264282 | 207.2.1.73 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 | 0.66 | 60.0 | 5.67e-01 | 98.1% | 80.8% |
| 5059872 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.66 | 62.0 | 4.95e-01 | 98.6% | 54.2% |
| 3599244 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.66 | 44.0 | 4.87e-01 | 97.6% | 82.4% |
| 5075881 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.66 | 63.0 | 4.26e-01 | 99.5% | 36.5% |
| 3716497 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.64 | 60.0 | 4.34e-01 | 98.1% | 45.8% |
| 1121177 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.63 | 59.0 | 5.70e-01 | 97.1% | 91.2% |
| 4884477 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.63 | 55.0 | 5.63e-01 | 99.0% | 95.5% |
| 2409669 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.63 | 58.0 | 4.67e-01 | 97.1% | 58.0% |
| 4980388 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.63 | 59.0 | 4.32e-01 | 97.6% | 45.4% |
| 146239 | 207.2.1.74 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › AC_1 | 0.61 | 44.0 | 5.02e-01 | 90.3% | 98.1% |
| 5021887 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.60 | 56.0 | 5.34e-01 | 96.1% | 85.5% |
| 4040388 | 207.8.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N | 0.58 | 54.0 | 4.20e-01 | 100.0% | 78.8% |
| 5058080 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.57 | 53.0 | 4.27e-01 | 100.0% | 76.6% |
| 3984121 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.57 | 52.0 | 4.13e-01 | 100.0% | 77.3% |
| 3717030 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.56 | 51.0 | 4.95e-01 | 98.6% | 92.8% |
| 4929186 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.56 | 51.0 | 3.99e-01 | 100.0% | 73.4% |
| 3715374 | 207.14.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet | 0.56 | 28.0 | 3.74e-01 | 85.0% | 91.4% |
| 3863800 | 207.4.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › TBCC | 0.55 | 49.0 | 4.87e-01 | 96.6% | 91.9% |
D6
medium
residues 604-764
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 61.0 | 5.66e-01 | 100.0% | 62.9% |
| 4oj6C03 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 61.0 | 4.49e-01 | 100.0% | 35.1% |
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 62.0 | 4.48e-01 | 100.0% | 34.0% |
| 2vjiA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 68.0 | 4.88e-01 | 100.0% | 46.2% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.71 | 47.0 | 4.78e-01 | 100.0% | 68.2% |
| 3lycA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 53.0 | 4.54e-01 | 100.0% | 51.5% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 64.0 | 4.48e-01 | 98.1% | 85.9% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 50.0 | 5.05e-01 | 100.0% | 74.7% |
| 5gkqB01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 64.0 | 4.67e-01 | 100.0% | 45.9% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 63.0 | 4.74e-01 | 100.0% | 43.5% |
| 7o7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.68 | 63.0 | 4.65e-01 | 100.0% | 43.8% |
| 7o79A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.67 | 63.0 | 4.62e-01 | 100.0% | 45.1% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 62.0 | 4.30e-01 | 100.0% | 39.1% |
| 4pufA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 47.0 | 3.82e-01 | 100.0% | 39.1% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 60.0 | 5.34e-01 | 100.0% | 80.5% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.64 | 48.0 | 4.86e-01 | 100.0% | 79.0% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 57.0 | 5.40e-01 | 100.0% | 82.7% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.62 | 57.0 | 4.58e-01 | 100.0% | 53.2% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 38.0 | 4.62e-01 | 90.7% | 93.4% |
| 4kh3A00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 44.0 | 3.09e-01 | 100.0% | 24.6% |
| 3nb2A01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.51 | 44.0 | 4.33e-01 | 100.0% | 84.7% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001023 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.81 | 50.0 | 3.78e-01 | 100.0% | 28.3% |
| 3963707 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.77 | 38.0 | 5.27e-01 | 88.2% | 96.2% |
| 5020282 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.76 | 44.0 | 5.63e-01 | 99.4% | 96.8% |
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 46.0 | 5.50e-01 | 100.0% | 90.5% |
| 3722181 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 45.0 | 5.48e-01 | 100.0% | 90.5% |
| 3926145 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.75 | 50.0 | 4.70e-01 | 100.0% | 55.9% |
| 5041137 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.75 | 33.0 | 4.82e-01 | 72.0% | 94.3% |
| 4968915 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 60.0 | 4.37e-01 | 100.0% | 32.5% |
| 4944416 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.74 | 61.0 | 4.39e-01 | 100.0% | 32.7% |
| 3187916 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 52.0 | 4.69e-01 | 100.0% | 53.6% |
| 3905958 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.73 | 39.0 | 4.22e-01 | 100.0% | 60.7% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.72 | 34.0 | 4.86e-01 | 78.3% | 100.0% |
| 3546698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.72 | 53.0 | 5.31e-01 | 100.0% | 75.6% |
| 4970402 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.71 | 60.0 | 4.93e-01 | 100.0% | 51.6% |
| 3997590 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.69 | 29.0 | 4.41e-01 | 73.9% | 100.0% |
| 1503840 | 207.13.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix | 0.69 | 56.0 | 4.23e-01 | 100.0% | 38.3% |
| 3450871 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.68 | 64.0 | 5.28e-01 | 100.0% | 70.2% |
| 3422718 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.68 | 64.0 | 4.60e-01 | 100.0% | 42.1% |
| 3711105 | 208.7.1.6 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Nucleoporin_FG | 0.68 | 36.0 | 3.82e-01 | 88.2% | 56.7% |
| 3330906 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.67 | 63.0 | 5.26e-01 | 100.0% | 71.2% |
| 2770984 | 207.2.1.24 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chondroitinas_B | 0.67 | 62.0 | 4.55e-01 | 100.0% | 42.2% |
| 4981313 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.67 | 59.0 | 5.12e-01 | 100.0% | 62.9% |
| 3710820 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.66 | 34.0 | 3.19e-01 | 91.3% | 39.5% |
| 3255127 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.66 | 62.0 | 4.79e-01 | 100.0% | 53.3% |
| 4955691 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.66 | 61.0 | 5.10e-01 | 100.0% | 61.5% |
| 3713639 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.65 | 50.0 | 4.32e-01 | 100.0% | 52.0% |
| 3502358 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.65 | 38.0 | 3.54e-01 | 100.0% | 46.7% |
| 3567623 | 208.7.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Epiglycanin_TR | 0.65 | 39.0 | 3.99e-01 | 100.0% | 60.6% |
| 1285029 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.65 | 60.0 | 4.00e-01 | 100.0% | 29.8% |
| 3560250 | 208.2.1.7 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Epiglycanin_TR | 0.65 | 39.0 | 4.13e-01 | 100.0% | 66.2% |
| 4980411 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.64 | 60.0 | 4.81e-01 | 100.0% | 54.0% |
| 4943747 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.64 | 46.0 | 4.03e-01 | 100.0% | 50.6% |
| 5033178 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.64 | 57.0 | 4.65e-01 | 100.0% | 53.3% |
| 3180893 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.64 | 59.0 | 4.58e-01 | 98.1% | 94.5% |
| 3744798 | 208.1.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 | 0.64 | 42.0 | 4.39e-01 | 100.0% | 71.3% |
| 3335252 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.64 | 56.0 | 5.21e-01 | 93.2% | 79.0% |
| 3787858 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.63 | 41.0 | 4.29e-01 | 100.0% | 70.0% |
| 3517885 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.63 | 46.0 | 4.41e-01 | 91.3% | 66.1% |
| 3428314 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.61 | 57.0 | 4.67e-01 | 100.0% | 63.5% |
| 5048711 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.61 | 49.0 | 4.55e-01 | 100.0% | 66.8% |
| 4971789 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 43.0 | 4.74e-01 | 100.0% | 92.3% |
| 3914295 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.59 | 42.0 | 4.13e-01 | 100.0% | 67.4% |
| 3254394 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 48.0 | 3.27e-01 | 100.0% | 25.1% |
| 3855439 | 207.8.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD | 0.57 | 49.0 | 4.10e-01 | 98.8% | 53.7% |
| 5067146 | 207.7.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Alpha subunit of glutamate synthase-C › Alpha subunit of glutamate synthase-C › GXGXG | 0.55 | 51.0 | 4.25e-01 | 100.0% | 71.3% |
| 4144650 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.54 | 49.0 | 4.18e-01 | 100.0% | 88.1% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.54 | 37.0 | 3.80e-01 | 98.8% | 72.3% |
D7
medium
residues 765-840
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r0sA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 3.46e-01 | 86.8% | 82.6% |
| 1jmkC01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.96e-01 | 100.0% | 35.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699914 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.69 | 49.0 | 4.41e-01 | 97.4% | 54.3% |
| 3440586 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 50.0 | 3.68e-01 | 100.0% | 30.5% |
| 5038902 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.50e-01 | 100.0% | 81.1% |
| 3218660 | 2007.1.3.27 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_tran_10_N | 0.54 | 36.0 | 3.18e-01 | 90.8% | 43.3% |