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NC_055832.1__YP_010106294.1__KNU90_gp074__00053

Bact-Vir

NC_055832.1__YP_010106294.1__KNU90_gp074__00053

Identity

Accession:
NC_055832 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Crassvirales› Steigviridae› Wulfhauvirus› Bacteroides_phage_DAC15

TaxID: 2710495

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-75
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kslA00 1.10.2010.20 Mainly Alpha › Orthogonal Bundle › Crustacean CHH/MIH/GIH neurohormone › 0.63 42.0 4.69e-01 71.8% 94.1%
D2 high residues 102-186
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 46.0 4.32e-01 70.6% 52.0%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.74 44.0 5.23e-01 70.6% 87.9%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 46.0 4.95e-01 98.8% 74.0%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.45e-01 70.6% 94.2%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 43.0 4.36e-01 72.9% 61.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 46.0 4.98e-01 96.5% 80.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 4.83e-01 75.3% 94.6%
3hl8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.64 44.0 3.78e-01 70.6% 60.4%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.64 45.0 4.67e-01 72.9% 89.9%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 42.0 3.94e-01 70.6% 78.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.62 43.0 3.94e-01 72.9% 56.0%
4rg8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.61 44.0 3.74e-01 75.3% 73.6%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 38.0 4.39e-01 100.0% 96.6%
1v29B02 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.59 41.0 3.94e-01 71.8% 85.6%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.37e-01 71.8% 51.1%
2hcjB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 36.0 3.46e-01 70.6% 60.6%
3wndA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 36.0 3.52e-01 71.8% 63.8%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.52 47.0 3.99e-01 96.5% 89.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.83 47.0 5.82e-01 70.6% 89.1%
4025829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 48.0 5.87e-01 96.5% 96.4%
3315471 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.77 47.0 4.80e-01 70.6% 62.4%
1567496 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.77 46.0 5.58e-01 70.6% 91.2%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 44.0 5.37e-01 70.6% 89.1%
3451175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 46.0 5.57e-01 72.9% 94.5%
3230520 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 45.0 4.44e-01 72.9% 56.7%
567 4.1.1.48 ↗ beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.74 44.0 5.27e-01 70.6% 89.5%
3514970 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 46.0 4.53e-01 75.3% 60.0%
3399422 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 46.0 4.40e-01 75.3% 57.9%
3500542 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 44.0 4.38e-01 72.9% 58.9%
3449268 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 4.93e-01 98.8% 70.6%
3824699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 47.0 5.28e-01 71.8% 87.7%
3302166 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 46.0 5.22e-01 96.5% 87.7%
4874232 4.1.1.29 ↗ beta barrels › SH3 › SH3 › SH3 › PSI_PsaE 0.70 49.0 5.39e-01 71.8% 94.2%
4049824 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 45.0 4.06e-01 75.3% 49.6%
3607981 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.09e-01 92.9% 83.8%
3356591 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.46e-01 97.6% 63.2%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 41.0 4.49e-01 74.1% 77.1%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 45.0 4.69e-01 72.9% 85.0%
2831858 4.1.1.22 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e 0.64 45.0 4.00e-01 72.9% 53.4%
3317400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 3.90e-01 76.5% 75.7%
3201878 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.34e-01 88.2% 96.4%
3367958 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 58.0 5.19e-01 100.0% 89.6%
3826746 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.96e-01 91.8% 86.3%
3351118 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 56.0 4.42e-01 100.0% 77.7%
3222570 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 41.0 3.76e-01 70.6% 75.7%
3349135 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.79e-01 98.8% 80.0%
3217950 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 41.0 3.85e-01 70.6% 79.0%
3934851 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 41.0 3.87e-01 70.6% 83.0%
4152374 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.28e-01 75.3% 83.3%
3583241 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 40.0 3.75e-01 70.6% 79.0%
3620222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 40.0 3.57e-01 70.6% 75.0%
3580039 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.58 47.0 3.91e-01 90.6% 88.7%
3997946 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.55 47.0 3.79e-01 100.0% 77.8%
3515884 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.38e-01 71.8% 72.5%
4323235 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.54 45.0 4.12e-01 90.6% 85.5%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 47.0 4.26e-01 95.3% 72.2%
3625996 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.52 43.0 4.14e-01 92.9% 86.0%
3625002 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.52 45.0 3.14e-01 97.6% 28.6%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.52 44.0 3.51e-01 100.0% 70.5%
3638086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 45.0 3.54e-01 98.8% 62.8%