Back to structures

NC_055840.1__YP_010107045.1__KNU98_gp098__00011

Bact-Vir

NC_055840.1__YP_010107045.1__KNU98_gp098__00011

Identity

Accession:
NC_055840 ↗
Kingdom:
phage

Quality

76.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-60
PDB
Domain cluster: representative
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3579534 192.29.1.144 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SK_channel 0.82 57.0 3.98e-01 75.0% 23.8%
3616792 633.6.1.8 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 0.72 53.0 3.64e-01 81.7% 23.5%
3618097 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.67 52.0 5.23e-01 81.7% 95.0%
3852376 109.4.1.80 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 0.62 40.0 2.90e-01 70.0% 24.4%
5013274 5011.1.1.0 extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa 0.59 47.0 4.24e-01 88.3% 74.1%