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NC_055841.1__YP_010107156.1__KNU99_gp014__00014
Bact-VirNC_055841.1__YP_010107156.1__KNU99_gp014__00014
Identity
- Accession:
- NC_055841 ↗
- Kingdom:
- phage
Quality
57.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pootjesviridae›
Heverleevirus›
Agrobacterium_phage_OLIVR5
TaxID: 2723773
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-81
D2
high
residues 91-137
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.59 | 49.0 | 4.06e-01 | 100.0% | 88.2% |
| 1iieA00 | 1.10.870.10 | Mainly Alpha › Orthogonal Bundle › HLA-dr Antigens Associated Invariant Chain; Chain A › MHC class II-associated invariant chain, trimerisation domain | 0.57 | 48.0 | 4.20e-01 | 100.0% | 64.0% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.94e-01 | 89.4% | 77.4% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 3.64e-01 | 100.0% | 62.7% |
| 2rcnA03 | 1.10.40.50 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Probable gtpase engc; domain 3 | 0.53 | 40.0 | 3.91e-01 | 100.0% | 79.0% |