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NC_055841.1__YP_010107267.1__KNU99_gp125__00125

Bact-Vir

NC_055841.1__YP_010107267.1__KNU99_gp125__00125

Identity

Accession:
NC_055841 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pootjesviridae› Heverleevirus› Agrobacterium_phage_OLIVR5

TaxID: 2723773

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57
PDB
Domain cluster: representative
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.92 72.0 7.00e-01 90.6% 75.9%
2nwbA02 1.20.58.480 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 77.0 4.86e-01 90.6% 20.3%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.91 78.0 7.30e-01 90.6% 77.4%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.90 77.0 4.61e-01 90.6% 16.8%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.89 75.0 5.23e-01 90.6% 31.8%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.88 69.0 7.18e-01 83.0% 98.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.88 74.0 5.69e-01 90.6% 47.3%
3fnbA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.87 74.0 5.59e-01 90.6% 50.0%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.87 80.0 5.54e-01 98.1% 65.8%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.86 73.0 6.94e-01 90.6% 78.7%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 72.0 7.00e-01 90.6% 82.8%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.85 71.0 5.61e-01 90.6% 60.2%
4i5sB03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.85 71.0 6.26e-01 90.6% 64.0%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.85 71.0 6.01e-01 90.6% 61.4%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.84 73.0 5.98e-01 94.3% 87.0%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.84 71.0 5.10e-01 92.5% 40.3%
2pusA04 6.10.140.300 Special › Helix non-globular › Helix Hairpins › 0.84 68.0 5.27e-01 86.8% 43.5%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 68.0 6.01e-01 86.8% 67.6%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.84 73.0 4.86e-01 96.2% 54.8%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.83 72.0 4.70e-01 92.5% 40.5%
8a1gC01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.83 74.0 4.95e-01 96.2% 74.0%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.83 72.0 5.76e-01 92.5% 53.7%
4dkcB00 1.20.1250.80 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-34 0.83 72.0 5.05e-01 96.2% 64.4%
1vp7A00 1.10.287.1040 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit 0.83 70.0 6.42e-01 94.3% 72.1%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.83 70.0 5.38e-01 92.5% 47.3%
4gyvE00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.81 70.0 4.59e-01 96.2% 44.2%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.81 65.0 5.52e-01 88.7% 93.2%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.81 70.0 5.61e-01 94.3% 99.0%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.78 64.0 4.93e-01 90.6% 41.0%
6fndA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 65.0 4.35e-01 90.6% 25.8%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 64.0 6.09e-01 90.6% 84.1%
2f2gA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.77 64.0 4.26e-01 94.3% 56.3%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 60.0 5.38e-01 88.7% 67.1%
3cazB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.76 62.0 4.15e-01 92.5% 73.3%
4fz4A00 1.20.140.130 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.76 63.0 4.59e-01 96.2% 48.7%
4e40A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.75 63.0 4.07e-01 96.2% 69.8%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.75 60.0 3.91e-01 90.6% 25.6%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 61.0 5.92e-01 92.5% 90.0%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.74 59.0 4.03e-01 90.6% 70.6%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 60.0 5.45e-01 90.6% 71.8%
3hl1A02 6.10.140.1530 Special › Helix non-globular › Helix Hairpins › 0.74 56.0 5.21e-01 90.6% 66.2%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.74 55.0 4.83e-01 81.1% 54.4%
3lnnB03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.73 59.0 5.52e-01 90.6% 98.5%
2yqdA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.73 60.0 4.64e-01 92.5% 85.0%
5nohA00 1.20.120.1350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain 0.73 63.0 5.06e-01 100.0% 49.5%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 60.0 5.51e-01 96.2% 79.5%
2d9dA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.72 62.0 5.27e-01 98.1% 71.9%
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 61.0 4.99e-01 98.1% 82.2%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 55.0 4.44e-01 84.9% 57.3%
5k29A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.71 60.0 4.92e-01 94.3% 88.7%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.70 60.0 4.94e-01 96.2% 78.6%
2ca5A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 56.0 5.40e-01 92.5% 75.8%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.69 55.0 4.49e-01 94.3% 95.6%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 53.0 4.27e-01 90.6% 41.9%
1i1rB00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.68 58.0 4.16e-01 100.0% 95.2%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.67 58.0 5.03e-01 100.0% 76.5%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.67 52.0 3.66e-01 96.2% 25.3%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.66 54.0 5.08e-01 88.7% 90.8%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.65 50.0 4.69e-01 88.7% 67.1%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 50.0 3.93e-01 92.5% 60.5%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.64 51.0 4.00e-01 94.3% 81.7%
1qguB04 1.20.89.10 Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 0.64 47.0 4.04e-01 79.2% 100.0%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.63 49.0 4.30e-01 83.0% 88.5%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.62 52.0 5.18e-01 92.5% 87.5%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.62 54.0 4.30e-01 100.0% 79.3%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 44.0 4.34e-01 88.7% 81.4%
4b7yD00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.59 52.0 4.31e-01 100.0% 88.7%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.58 50.0 4.94e-01 96.2% 87.7%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.58 46.0 3.86e-01 90.6% 52.9%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.53 41.0 3.96e-01 90.6% 98.4%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4202466 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.95 76.0 8.26e-01 84.9% 100.0%
4939089 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.94 78.0 4.75e-01 88.7% 16.6%
3397137 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.93 76.0 6.63e-01 86.8% 61.3%
3967983 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.92 79.0 6.69e-01 90.6% 60.0%
4597007 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.90 71.0 7.65e-01 84.9% 97.8%
3505608 192.29.1.1 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB_dom 0.90 76.0 6.67e-01 90.6% 69.3%
4213046 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.90 76.0 7.01e-01 90.6% 73.8%
3880737 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.90 75.0 5.01e-01 90.6% 27.0%
4214499 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.89 75.0 6.78e-01 90.6% 68.6%
4985493 3834.1.1.0 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain 0.89 76.0 4.70e-01 90.6% 95.3%
3809145 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.89 75.0 4.55e-01 90.6% 16.3%
4883924 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.89 75.0 6.44e-01 90.6% 60.0%
3983659 4970.1.1.0 ↗ alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.89 72.0 6.65e-01 86.8% 70.8%
3646011 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.88 74.0 6.68e-01 90.6% 68.6%
3624728 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.88 76.0 6.34e-01 92.5% 70.6%
3755476 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.88 73.0 4.96e-01 90.6% 27.4%
4977369 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.88 80.0 5.04e-01 100.0% 60.4%
3416038 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.88 74.0 5.45e-01 92.5% 50.8%
3622515 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.87 76.0 6.39e-01 94.3% 69.4%
3471215 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.87 74.0 6.48e-01 90.6% 64.0%
3399701 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.87 74.0 5.34e-01 92.5% 47.1%
4544002 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.87 76.0 7.84e-01 94.3% 100.0%
3348106 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.87 73.0 4.52e-01 90.6% 17.8%
3418848 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.87 72.0 4.37e-01 90.6% 16.0%
4674738 133.1.1.0 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) 0.86 78.0 5.00e-01 98.1% 49.1%
4581983 5086.1.1.13 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB 0.86 72.0 5.16e-01 90.6% 35.7%
4541195 3755.3.1.470 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB 0.86 71.0 5.25e-01 90.6% 38.5%
3874130 133.1.1.5 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › DH_Alsin 0.86 76.0 4.99e-01 98.1% 51.4%
5038847 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.85 72.0 6.47e-01 90.6% 68.6%
3615269 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.85 77.0 4.99e-01 98.1% 58.1%
3699313 6155.1.1.4 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC 0.85 77.0 6.32e-01 98.1% 64.4%
4959101 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.85 72.0 4.56e-01 92.5% 21.6%
4565383 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.85 72.0 7.37e-01 92.5% 98.0%
4970593 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.85 77.0 4.84e-01 100.0% 60.4%
4956224 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.84 71.0 4.55e-01 92.5% 23.4%
4977429 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.84 69.0 5.04e-01 90.6% 34.3%
3200787 5086.1.1.211 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF30554 0.84 76.0 4.75e-01 98.1% 20.8%
4933354 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.84 75.0 4.77e-01 98.1% 22.1%
4873586 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.84 71.0 6.25e-01 90.6% 64.9%
5048239 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.84 71.0 5.42e-01 92.5% 62.6%
3637653 3755.3.1.481 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF30554 0.84 75.0 5.28e-01 98.1% 34.2%
3894565 4207.1.2.65 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › OLF 0.84 69.0 4.06e-01 90.6% 12.0%
3286637 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.84 67.0 4.69e-01 88.7% 28.5%
5050698 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.84 68.0 5.04e-01 88.7% 65.1%
3727274 3758.1.1.69 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › PF30554 0.83 75.0 4.76e-01 98.1% 22.6%
3742811 604.6.1.1 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.83 76.0 5.79e-01 100.0% 68.7%
4238120 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.83 70.0 4.55e-01 90.6% 23.1%
4977784 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.83 68.0 4.35e-01 88.7% 20.0%
3886417 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.83 73.0 4.84e-01 98.1% 49.0%
3588519 101.1.2.49 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.83 74.0 5.10e-01 98.1% 46.7%
222003 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.83 73.0 4.91e-01 98.1% 57.1%
5073476 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.82 69.0 4.41e-01 92.5% 22.6%
3204604 6155.1.1.4 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC 0.82 71.0 6.29e-01 96.2% 77.3%
4446713 604.11.1.1 ↗ alpha bundles › Spectrin repeat-like › XseB-like › XseB-like › Exonuc_VII_S 0.82 73.0 6.45e-01 98.1% 70.7%
3220914 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.81 68.0 4.72e-01 92.5% 41.8%
4951260 601.14.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.81 65.0 4.77e-01 88.7% 33.6%
3988454 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.81 67.0 6.10e-01 90.6% 68.6%
3265664 4336.1.1.0 ↗ alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like 0.80 64.0 5.40e-01 88.7% 57.8%
5052188 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 70.0 4.08e-01 94.3% 13.8%
3386463 3538.1.1.5 ↗ extended segments › MerF › MerF › MerF › FHIPEP 0.80 68.0 6.80e-01 96.2% 90.9%
4170866 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.79 62.0 6.62e-01 84.9% 100.0%
4958744 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 65.0 5.13e-01 94.3% 72.7%
3495233 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.78 67.0 4.81e-01 98.1% 65.2%
3742447 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.77 61.0 4.95e-01 86.8% 46.0%
5055968 605.1.1.357 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › YgaP-like_TM 0.76 64.0 5.81e-01 92.5% 75.7%
5071097 3834.1.1.25 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.76 63.0 3.92e-01 94.3% 17.2%
3531423 5106.1.1.14 ↗ extended segments › PetG subunit of the cytochrome b6f complex › PetG subunit of the cytochrome b6f complex › PetG subunit of the cytochrome b6f complex › TMEM174 0.75 60.0 5.96e-01 90.6% 87.3%
3360612 284.1.1.1 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.74 58.0 4.43e-01 84.9% 89.2%
3259629 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.74 62.0 5.04e-01 92.5% 55.0%
3819100 109.4.1.1556 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 0.71 62.0 3.36e-01 98.1% 7.3%
3757999 219.1.1.9 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C12 0.66 52.0 3.32e-01 90.6% 96.3%
3705716 3559.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 0.66 51.0 3.95e-01 90.6% 36.2%
3387232 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.60 47.0 4.05e-01 94.3% 85.0%