NC_055846.1__YP_010107834.1__KNV04_gp24__00024

Bact-Vir

Identity

92.8 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Peduovirus› Yersinia_phage_vB_YpM_50

TaxID: 2736202

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-194

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5019992	884.1.1.0 ↗	a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain	0.50	26.0	3.20e-01	97.4%	77.4%

D2 high residues 199-370

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4dwlA00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.54	26.0	3.16e-01	100.0%	67.6%
1tj7A01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.54	27.0	3.42e-01	92.4%	78.1%
2np5D00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.51	30.0	3.20e-01	90.7%	62.7%
3m7gA02	1.10.8.1010	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.50	28.0	3.50e-01	98.8%	92.6%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5060248	4044.1.1.0 ↗	alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins	0.67	30.0	4.45e-01	99.4%	100.0%
3261605	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.56	27.0	3.74e-01	70.3%	95.0%