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NC_055865.1__YP_010109960.1__KNV23_gp34__00034

Bact-Vir

NC_055865.1__YP_010109960.1__KNV23_gp34__00034

Identity

Accession:
NC_055865 ↗
Kingdom:
phage

Quality

72.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-79_117-176
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 42.0 3.34e-01 96.7% 32.8%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.58 37.0 4.28e-01 100.0% 90.9%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 35.0 4.12e-01 93.5% 94.8%
3aqbA00 1.20.120.1450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.53 44.0 3.92e-01 93.5% 96.3%
2q7rB00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.53 41.0 3.55e-01 84.8% 84.4%
3dkaB01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 37.0 3.36e-01 75.0% 92.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3246288 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.56 36.0 3.64e-01 90.2% 64.2%
D2 medium residues 80-116_177-315
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qexA03 2.60.40.1680 Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like 0.53 31.0 3.75e-01 99.4% 87.7%