←Back to structures

NC_055866.1__YP_010110030.1__KNV24_gp18__00018

Bact-Vir

NC_055866.1__YP_010110030.1__KNV24_gp18__00018

Identity

Accession:
NC_055866 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rountreeviridae› Copernicusvirus› Enterococcus_phage_AE4_17

TaxID: 2759198

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 75-147
PDB
Domain cluster: rep: OR354820.1__WNM50404.1__Alsa1_CDS0054__00054__D69-134
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF11753.14 best DUF3310 59.0 5.60e-16 79.5% 95.0%
D2 medium residues 44-73
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1llmD02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.85 62.0 5.09e-01 80.0% 43.6%
2wbtB02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.80 64.0 5.55e-01 100.0% 59.6%
2yucA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.68 50.0 4.15e-01 96.7% 42.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3246926 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.98 73.0 7.39e-01 80.0% 80.0%
3801657 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.92 77.0 7.07e-01 100.0% 72.5%
3192876 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.92 72.0 6.88e-01 86.7% 74.3%
3441848 386.1.1.31 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2HE 0.91 76.0 7.32e-01 100.0% 82.9%
3332373 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.91 76.0 6.95e-01 100.0% 72.5%
3473964 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.90 74.0 7.02e-01 90.0% 82.9%
3703548 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.89 72.0 7.25e-01 90.0% 90.0%
3208184 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.88 78.0 5.46e-01 100.0% 33.7%
3402446 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.88 64.0 6.72e-01 80.0% 96.0%
3772010 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.85 62.0 5.96e-01 80.0% 68.6%
3849800 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.85 64.0 6.49e-01 86.7% 86.7%
3221618 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.79 66.0 4.88e-01 93.3% 48.0%
3233167 386.1.1.20 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met 0.79 62.0 6.22e-01 93.3% 96.7%