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NC_055907.1__YP_010113660.1__KNV65_gp036__00036

Bact-Vir

Identity

Accession:: NC_055907 ↗
Kingdom:: phage

Quality

75.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Denvervirus› Enterococcus_phage_9183

TaxID: 2763102

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 111-152

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1tu3J00	1.20.5.730	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin	0.92	82.0	7.54e-01	100.0%	77.4%
2wzkA01	1.20.1310.10	Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats	0.85	74.0	5.21e-01	100.0%	33.1%
3a8pA02	6.10.140.680	Special › Helix non-globular › Helix Hairpins ›	0.80	72.0	5.12e-01	100.0%	36.0%
4l0rB00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.79	70.0	5.73e-01	100.0%	56.2%
1i6zA00	1.20.58.120	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain	0.79	69.0	4.79e-01	100.0%	40.7%
5cxdB01	3.90.470.20	Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain	0.77	60.0	4.30e-01	88.1%	30.0%
5isuA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.76	49.0	3.03e-01	78.6%	13.3%
3kr9A02	1.10.287.1890	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.74	58.0	5.11e-01	85.7%	60.7%
4fvmA06	1.10.287.690	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain	0.73	59.0	5.67e-01	90.5%	77.1%
4oevA03	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.71	46.0	2.85e-01	78.6%	12.7%
3aqbA00	1.20.120.1450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.64	51.0	3.66e-01	100.0%	28.9%
5mmjn01	1.10.287.1480	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.58	43.0	3.56e-01	83.3%	39.3%
5tvwA01	3.40.50.11260	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.56	38.0	2.87e-01	76.2%	25.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5041226	604.16.1.0 ↗	alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain	0.85	73.0	6.19e-01	92.9%	63.1%
3615973	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.84	71.0	5.07e-01	92.9%	35.7%
3794380	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.84	73.0	5.58e-01	95.2%	45.6%
3744696	603.1.1.2 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3	0.79	70.0	5.13e-01	100.0%	39.0%
3570403	3291.1.1.0 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related	0.79	70.0	4.88e-01	100.0%	32.8%
3492118	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.77	67.0	4.06e-01	100.0%	15.8%
3238347	3567.1.1.0 ↗	a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer	0.76	68.0	4.15e-01	100.0%	19.6%
3476368	387.1.1.0 ↗	few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related	0.70	49.0	4.70e-01	76.2%	64.6%