←Back to structures
NC_055910.1__YP_010114028.1__KNV68_gp117__00143
Bact-VirNC_055910.1__YP_010114028.1__KNV68_gp117__00143
Identity
- Accession:
- NC_055910 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Taxonomy
TaxID: 2783547
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-93
Domain cluster:
rep: MT227924.1__QIW88970.1__phiV208_3__00003__D3-82
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 23.0 | 3.27e-01 | 76.4% | 96.4% |
| 2qlvB02 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 26.0 | 3.47e-01 | 82.0% | 97.4% |
| 2ek0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 39.0 | 3.93e-01 | 100.0% | 76.7% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.50 | 40.0 | 2.86e-01 | 91.0% | 51.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4403166 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.69 | 27.0 | 3.12e-01 | 74.2% | 46.2% |
| 3717505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 26.0 | 2.74e-01 | 74.2% | 47.1% |
| 3882431 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.53 | 46.0 | 3.71e-01 | 100.0% | 92.1% |
| 5032176 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 30.0 | 3.56e-01 | 89.9% | 85.0% |