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NC_055910.1__YP_010114028.1__KNV68_gp117__00143

Bact-Vir

NC_055910.1__YP_010114028.1__KNV68_gp117__00143

Identity

Accession:
NC_055910 ↗
Kingdom:
phage

Quality

84.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-93
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s7mA03 2.20.25.140 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.60 23.0 3.27e-01 76.4% 96.4%
2qlvB02 2.20.25.290 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 26.0 3.47e-01 82.0% 97.4%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.53 39.0 3.93e-01 100.0% 76.7%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.50 40.0 2.86e-01 91.0% 51.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4403166 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.69 27.0 3.12e-01 74.2% 46.2%
3717505 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 26.0 2.74e-01 74.2% 47.1%
3882431 2004.1.1.50 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin 0.53 46.0 3.71e-01 100.0% 92.1%
5032176 1.1.3.2 beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin 0.52 30.0 3.56e-01 89.9% 85.0%