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NC_055915.1__YP_010114424.1__KNV73_gp012__00012
Bact-VirNC_055915.1__YP_010114424.1__KNV73_gp012__00012
Identity
- Accession:
- NC_055915 ↗
- Kingdom:
- phage
Quality
94.2
mean pLDDT
Taxonomy
TaxID: 2801477
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-191
Domain cluster:
rep: BML_coassembly_scaffold_35_prodigal-single.1__X__X__00358__D33-214
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01223.30 best | Endonuclease_NS | 90.0 | 2.60e-25 | 98.8% | 75.8% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qn0B00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.93 | 90.0 | 7.80e-01 | 100.0% | 81.6% |
| 4a1nA01 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.92 | 89.0 | 7.71e-01 | 100.0% | 81.7% |
| 1zm8A00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.92 | 89.0 | 7.71e-01 | 100.0% | 77.8% |
| 5inhA04 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.89 | 85.0 | 6.92e-01 | 100.0% | 73.4% |
| 1ql0A00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.89 | 85.0 | 7.40e-01 | 100.0% | 77.6% |
| 4gtwB02 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.81 | 78.0 | 6.34e-01 | 100.0% | 69.7% |
| 2xgrA00 | 3.40.570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Extracellular Endonuclease; Chain A › Extracellular Endonuclease, subunit A | 0.69 | 61.0 | 5.80e-01 | 91.8% | 80.2% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 29.0 | 3.35e-01 | 90.6% | 61.4% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.55 | 29.0 | 3.40e-01 | 92.4% | 69.6% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.55 | 26.0 | 3.02e-01 | 95.3% | 59.5% |
| 3daaA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.54 | 32.0 | 3.68e-01 | 80.0% | 81.4% |
| 1zs7A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.53 | 24.0 | 2.98e-01 | 89.4% | 66.3% |
| 1h30A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 35.0 | 3.32e-01 | 91.2% | 55.3% |
| 1s68A02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 33.0 | 3.96e-01 | 89.4% | 99.1% |
| 5ce8A01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.51 | 31.0 | 3.50e-01 | 79.4% | 80.5% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387043 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.95 | 92.0 | 8.64e-01 | 100.0% | 88.4% |
| 3406079 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.94 | 91.0 | 7.87e-01 | 100.0% | 82.1% |
| 3262291 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.93 | 90.0 | 7.20e-01 | 100.0% | 74.9% |
| 2468298 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 89.0 | 7.64e-01 | 100.0% | 80.1% |
| 147158 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 89.0 | 7.75e-01 | 100.0% | 80.5% |
| 8232 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 89.0 | 7.70e-01 | 100.0% | 77.5% |
| 2650317 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.92 | 88.0 | 7.97e-01 | 100.0% | 88.1% |
| 3739928 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.91 | 88.0 | 7.50e-01 | 100.0% | 78.7% |
| 3699383 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.91 | 88.0 | 7.28e-01 | 100.0% | 74.8% |
| 3718195 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.90 | 86.0 | 7.27e-01 | 100.0% | 73.3% |
| 2860134 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.89 | 86.0 | 6.71e-01 | 100.0% | 66.6% |
| 3977947 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.89 | 85.0 | 7.39e-01 | 100.0% | 76.2% |
| 8231 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.89 | 85.0 | 7.40e-01 | 100.0% | 77.6% |
| 3907317 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 86.0 | 7.20e-01 | 100.0% | 78.1% |
| 3921416 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 85.0 | 7.16e-01 | 100.0% | 81.5% |
| 3883616 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 85.0 | 7.09e-01 | 100.0% | 79.6% |
| 3907410 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 85.0 | 7.27e-01 | 100.0% | 77.0% |
| 3404045 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 84.0 | 6.97e-01 | 100.0% | 89.1% |
| 3969210 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.88 | 84.0 | 6.86e-01 | 100.0% | 86.0% |
| 3400563 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 6.82e-01 | 100.0% | 85.5% |
| 3857159 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.87 | 84.0 | 6.54e-01 | 100.0% | 66.0% |
| 3407640 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 6.80e-01 | 100.0% | 86.9% |
| 3921364 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.87 | 84.0 | 7.09e-01 | 100.0% | 72.6% |
| 3889557 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 83.0 | 7.67e-01 | 100.0% | 84.1% |
| 2455579 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 82.0 | 6.42e-01 | 100.0% | 66.1% |
| 3411641 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 82.0 | 7.03e-01 | 100.0% | 92.2% |
| 3882094 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.86 | 83.0 | 7.27e-01 | 100.0% | 78.6% |
| 3396412 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.85 | 82.0 | 7.17e-01 | 100.0% | 87.8% |
| 3601605 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.84 | 81.0 | 7.00e-01 | 100.0% | 78.9% |
| 3543955 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.83 | 79.0 | 6.60e-01 | 100.0% | 73.0% |
| 3622236 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.81 | 77.0 | 6.38e-01 | 100.0% | 68.2% |
| 3576971 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.80 | 77.0 | 7.07e-01 | 100.0% | 80.5% |
| 3857855 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.79 | 76.0 | 6.32e-01 | 100.0% | 73.0% |
| 3501496 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.79 | 75.0 | 6.12e-01 | 100.0% | 69.7% |
| 3247311 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.72 | 68.0 | 5.75e-01 | 100.0% | 84.1% |
| 3408357 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.70 | 63.0 | 5.95e-01 | 100.0% | 81.5% |
| 4953417 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.68 | 27.0 | 4.22e-01 | 85.3% | 90.0% |
| 3575872 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.66 | 63.0 | 5.32e-01 | 100.0% | 80.0% |
| 3792478 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 59.0 | 5.23e-01 | 100.0% | 80.0% |