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NC_055915.1__YP_010114435.1__KNV73_gp023__00023

Bact-Vir

NC_055915.1__YP_010114435.1__KNV73_gp023__00023

Identity

Accession:
NC_055915 ↗
Kingdom:
phage

Quality

89.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Immutovirus› Flavobacterium_phage_vB_FspM_immuto_2-6A

TaxID: 2801477

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-97
PDB
Domain cluster: rep: GQ478086.1__ACZ64040.1__X__00021__D3-94
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7wq5A01 3.30.730.10 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain 0.68 40.0 5.01e-01 72.9% 96.6%
5zc1D00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 45.0 4.52e-01 70.8% 79.6%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.65 46.0 4.20e-01 74.0% 78.5%
1vkcA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 34.0 3.01e-01 97.9% 35.3%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.63 38.0 3.00e-01 95.8% 30.2%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.62 35.0 3.52e-01 85.4% 54.7%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 46.0 3.94e-01 80.2% 94.4%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 53.0 3.62e-01 97.9% 56.5%
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 43.0 3.24e-01 78.1% 95.3%
5ic7A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.36e-01 97.9% 60.3%
6bm0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 3.18e-01 96.9% 47.7%
4yfjB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 38.0 3.25e-01 74.0% 98.7%
8adlB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 44.0 3.07e-01 96.9% 27.0%
6t5kC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 37.0 2.87e-01 90.6% 31.2%
3i9sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 38.0 3.19e-01 76.0% 96.9%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.28e-01 90.6% 61.6%
5f47B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 37.0 3.14e-01 72.9% 96.1%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.52 35.0 3.18e-01 70.8% 64.3%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 46.0 3.19e-01 97.9% 50.3%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.51 40.0 3.35e-01 82.3% 74.7%
8siuA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.06e-01 97.9% 46.0%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.13e-01 96.9% 52.6%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 46.0 3.16e-01 97.9% 42.2%
4zn4A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 2.98e-01 97.9% 35.7%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.96e-01 97.9% 34.0%
2fe7B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 36.0 3.06e-01 76.0% 91.0%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.95e-01 97.9% 52.7%
1floC02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.50 40.0 3.07e-01 90.6% 73.9%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 44.0 3.01e-01 97.9% 49.3%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945393 7089.1.1.2 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 0.83 62.0 6.80e-01 85.4% 93.8%
3409624 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.66 52.0 3.30e-01 84.4% 33.3%
3924277 109.54.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 0.63 46.0 2.66e-01 76.0% 22.3%
4102119 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.61 54.0 3.49e-01 97.9% 41.4%
4943640 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 42.0 3.81e-01 75.0% 74.4%
3740896 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.58 44.0 3.05e-01 97.9% 24.4%
3702616 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 44.0 4.12e-01 83.3% 96.0%
5051049 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 40.0 3.72e-01 74.0% 72.0%
3176295 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 48.0 3.26e-01 92.7% 29.6%
3631256 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 48.0 3.30e-01 97.9% 46.4%
4357447 5.1.4.158 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.56 50.0 3.28e-01 97.9% 53.9%
3962822 331.3.1.2 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.56 34.0 3.08e-01 96.9% 43.7%
3610611 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.55 49.0 3.25e-01 96.9% 43.4%
3205589 5.1.11.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Rrn6_beta-prop 0.55 49.0 3.20e-01 96.9% 33.4%
1095153 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 50.0 3.30e-01 99.0% 44.4%
3713696 5.1.4.297 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.55 49.0 3.27e-01 97.9% 32.2%
3342304 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 48.0 4.05e-01 94.8% 86.5%
3939547 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 50.0 3.41e-01 100.0% 40.3%
3691522 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 49.0 3.30e-01 97.9% 46.0%
4013150 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 47.0 3.23e-01 97.9% 40.3%
3487292 5.1.4.34 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.54 48.0 2.98e-01 97.9% 30.3%
3546198 5.1.4.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.54 47.0 3.27e-01 97.9% 45.8%
3174263 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.11e-01 97.9% 46.9%
3511884 5.1.4.262 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.53 48.0 3.12e-01 99.0% 34.4%
3787176 4099.1.1.4 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.53 37.0 3.38e-01 71.9% 73.8%
3804236 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.21e-01 97.9% 94.3%
3559756 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 3.25e-01 97.9% 40.0%
3917795 5.1.4.173 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.53 47.0 3.19e-01 97.9% 41.4%
3448363 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 45.0 3.52e-01 96.9% 98.3%
3445812 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.19e-01 97.9% 96.4%
3410497 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.53 46.0 3.06e-01 97.9% 41.9%
3740661 5.1.4.119 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.53 45.0 3.01e-01 96.9% 39.3%
3739945 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.53 46.0 3.11e-01 97.9% 61.1%
3567155 220.1.1.115 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 0.52 40.0 3.33e-01 82.3% 77.7%
3368252 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.52 47.0 3.07e-01 97.9% 41.1%
5000262 5.1.11.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA 0.52 46.0 3.07e-01 97.9% 51.9%
3608681 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.52 45.0 2.98e-01 97.9% 39.5%
4622010 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.08e-01 97.9% 31.3%
4057631 5.1.4.172 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_CAF1B_HIR1 0.52 46.0 3.08e-01 97.9% 41.1%
None — 0.52 44.0 3.13e-01 97.9% 46.1%
3550359 5.1.4.254 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NOL10_N 0.52 45.0 3.02e-01 97.9% 39.2%
4683377 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.05e-01 97.9% 40.3%
3478132 5.1.4.327 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.52 46.0 3.00e-01 97.9% 31.6%
3742766 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 45.0 3.14e-01 97.9% 59.7%
4026020 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 3.04e-01 97.9% 39.1%
3223329 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 2.85e-01 96.9% 47.8%
3891698 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.51 45.0 3.18e-01 95.8% 41.0%
3168805 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 46.0 3.15e-01 97.9% 34.8%
3696782 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 46.0 2.91e-01 97.9% 26.0%
3177659 5.1.4.307 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.51 45.0 2.96e-01 97.9% 38.4%
3606492 5.1.4.606 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_CFAP43 0.51 45.0 3.07e-01 96.9% 42.6%
5034142 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 2.98e-01 97.9% 50.0%
3555241 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 46.0 3.13e-01 97.9% 40.3%
3904397 5.1.4.162 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD_LRWD1 0.51 45.0 2.99e-01 97.9% 32.3%
2569205 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 45.0 2.99e-01 97.9% 33.7%
3707052 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 44.0 2.90e-01 100.0% 76.6%
3228385 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.50 44.0 2.69e-01 97.9% 26.0%
4030680 5.1.4.258 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.50 43.0 2.90e-01 96.9% 47.2%