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NC_055915.1__YP_010114438.1__KNV73_gp026__00026

Bact-Vir

Identity

Accession:: NC_055915 ↗
Kingdom:: phage

Quality

95.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Immutovirus› Flavobacterium_phage_vB_FspM_immuto_2-6A

TaxID: 2801477

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-64

PDB

Domain cluster: rep: IMGVR_UViG_2529292698_000003-2529292698-2529621124__D3-62

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1dwnA00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.70	49.0	3.83e-01	98.4%	35.4%
1aq3A00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.64	42.0	3.37e-01	98.4%	33.3%
2vf9A00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.57	37.0	3.05e-01	100.0%	32.1%
1j27A00	3.30.70.1120	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like	0.53	43.0	3.75e-01	90.5%	100.0%
1mt1B00	3.50.20.10	Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B	0.52	42.0	3.46e-01	88.9%	60.7%
3ccfA00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.51	39.0	2.80e-01	92.1%	92.9%
2d42A01	2.170.15.10	Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3	0.50	36.0	2.69e-01	79.4%	69.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3538041	11.1.1.297 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2	0.61	53.0	3.89e-01	96.8%	90.3%
4891117	4038.1.1.11 ↗	alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › SU10_portal	0.58	45.0	2.65e-01	87.3%	58.6%
3559191	1086.1.1.0 ↗	beta meanders › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2	0.56	41.0	4.24e-01	90.5%	94.5%
3827396	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.55	39.0	3.41e-01	79.4%	89.1%
5054385	512.1.1.1 ↗	a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st	0.54	29.0	2.86e-01	84.1%	41.4%
4945976	302.4.1.1 ↗	a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C	0.52	42.0	3.40e-01	88.9%	60.0%
3728382	7579.1.1.44 ↗	a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6	0.52	37.0	2.36e-01	76.2%	63.4%
3186772	10.32.1.203 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin	0.51	37.0	2.77e-01	81.0%	82.6%
3603587	512.1.1.1 ↗	a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st	0.51	34.0	3.08e-01	92.1%	50.6%
3287138	303.1.1.1 ↗	a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC	0.50	40.0	3.04e-01	88.9%	43.2%