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NC_055915.1__YP_010114538.1__KNV73_gp145__00126

Bact-Vir

NC_055915.1__YP_010114538.1__KNV73_gp145__00126

Identity

Accession:
NC_055915 ↗
Kingdom:
phage

Quality

69.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Immutovirus› Flavobacterium_phage_vB_FspM_immuto_2-6A

TaxID: 2801477

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-92
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3pp9B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.65 55.0 4.33e-01 94.0% 70.1%
5nz7A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.60 45.0 3.05e-01 81.9% 71.5%
2mj7A00 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.60 49.0 4.14e-01 91.6% 87.2%
1wueB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 42.0 3.48e-01 74.7% 96.0%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 40.0 3.13e-01 74.7% 33.2%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 44.0 4.18e-01 86.7% 82.7%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 4.23e-01 98.8% 65.9%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.55 46.0 4.09e-01 96.4% 76.8%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.55 45.0 3.57e-01 95.2% 74.9%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 38.0 3.45e-01 72.3% 90.4%
1lurA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.55 43.0 2.97e-01 89.2% 50.2%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.54 44.0 4.32e-01 92.8% 84.3%
1y4wA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 47.0 3.10e-01 100.0% 36.9%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.52 44.0 2.89e-01 100.0% 21.9%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 44.0 3.00e-01 100.0% 32.6%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.51 42.0 3.74e-01 92.8% 84.0%
7bwcA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 45.0 3.05e-01 100.0% 33.4%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.50 35.0 3.24e-01 73.5% 98.2%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3404297 4.1.1.326 ↗ beta barrels › SH3 › SH3 › SH3 › Chitin_bind_4 0.67 42.0 4.88e-01 72.3% 94.5%
409974 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.65 55.0 4.33e-01 94.0% 70.1%
3213147 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.61 46.0 4.21e-01 83.1% 84.3%
3883050 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 42.0 2.93e-01 72.3% 89.1%
3593833 74.1.1.0 ↗ beta duplicates or obligate multimers › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain › Transcription factor IIA (TFIIA), beta-barrel domain 0.60 32.0 4.07e-01 90.4% 89.8%
3508125 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.57 45.0 4.16e-01 86.7% 88.2%
3801700 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 48.0 3.38e-01 95.2% 51.7%
3252404 331.4.1.1 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 0.57 45.0 4.36e-01 92.8% 75.8%
3509038 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.57 45.0 4.27e-01 97.6% 72.0%
3513931 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.57 45.0 4.13e-01 86.7% 88.2%
1841016 79.1.1.9 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.57 40.0 2.95e-01 74.7% 29.8%
3280079 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.56 44.0 3.83e-01 85.5% 80.0%
3509349 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.56 44.0 4.07e-01 86.7% 88.2%
3670358 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.56 45.0 4.27e-01 88.0% 97.0%
3518949 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.56 44.0 3.94e-01 86.7% 80.8%
6331 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 49.0 4.22e-01 98.8% 65.4%
3547884 389.1.2.7 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › THBD 0.55 38.0 4.11e-01 73.5% 91.4%
5024242 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.54 44.0 3.63e-01 90.4% 73.5%
3255783 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.54 35.0 3.76e-01 84.3% 77.1%
4964966 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.53 43.0 3.58e-01 91.6% 77.4%
3241447 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 39.0 3.48e-01 79.5% 87.5%
3276021 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.52 44.0 2.69e-01 100.0% 14.4%
3610850 206.1.1.72 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.52 43.0 2.96e-01 94.0% 48.9%
3661138 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.52 39.0 3.32e-01 81.9% 79.3%
3510696 5.1.4.149 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 0.51 46.0 3.36e-01 100.0% 42.7%
3993976 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 38.0 3.60e-01 81.9% 91.4%
3445812 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 43.0 3.76e-01 100.0% 83.6%
3938828 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.89e-01 100.0% 26.7%
3704922 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 42.0 2.73e-01 91.6% 98.1%