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NC_055915.1__YP_010114604.1__KNV73_gp079__00192
Bact-VirNC_055915.1__YP_010114604.1__KNV73_gp079__00192
Identity
- Accession:
- NC_055915 ↗
- Kingdom:
- phage
Quality
57.1
mean pLDDT
Taxonomy
TaxID: 2801477
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.76 | 52.0 | 4.56e-01 | 71.4% | 94.0% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.74 | 45.0 | 4.56e-01 | 71.4% | 61.4% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.05e-01 | 73.2% | 98.2% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 4.40e-01 | 71.4% | 83.6% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 61.0 | 4.18e-01 | 100.0% | 31.0% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 48.0 | 4.41e-01 | 73.2% | 85.9% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 4.11e-01 | 71.4% | 87.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 4.62e-01 | 75.0% | 75.8% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 47.0 | 4.43e-01 | 73.2% | 85.3% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 4.09e-01 | 73.2% | 68.7% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.67 | 49.0 | 4.02e-01 | 78.6% | 44.8% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.66 | 51.0 | 3.13e-01 | 85.7% | 74.3% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.66 | 49.0 | 4.03e-01 | 78.6% | 58.2% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 51.0 | 4.48e-01 | 87.5% | 65.5% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 47.0 | 4.20e-01 | 78.6% | 62.5% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 46.0 | 3.75e-01 | 75.0% | 63.8% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 50.0 | 3.81e-01 | 85.7% | 57.3% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 46.0 | 3.80e-01 | 78.6% | 43.9% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 41.0 | 3.56e-01 | 75.0% | 43.2% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 4.12e-01 | 80.4% | 64.6% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.62 | 40.0 | 3.84e-01 | 82.1% | 56.1% |
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 42.0 | 3.55e-01 | 71.4% | 55.2% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 40.0 | 3.29e-01 | 75.0% | 36.5% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 50.0 | 3.77e-01 | 92.9% | 52.1% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 47.0 | 3.94e-01 | 83.9% | 60.4% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 45.0 | 3.73e-01 | 83.9% | 53.2% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 43.0 | 3.71e-01 | 78.6% | 86.5% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 3.78e-01 | 92.9% | 60.0% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.60 | 45.0 | 4.10e-01 | 82.1% | 76.6% |
| 1t9mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 51.0 | 3.55e-01 | 100.0% | 51.0% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 49.0 | 3.78e-01 | 92.9% | 57.6% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.60 | 51.0 | 3.95e-01 | 92.9% | 82.5% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.59 | 46.0 | 3.66e-01 | 85.7% | 57.3% |
| 1txkA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 51.0 | 3.11e-01 | 100.0% | 27.2% |
| 1i7dA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.59 | 49.0 | 3.64e-01 | 91.1% | 94.3% |
| 5ccbA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 44.0 | 4.07e-01 | 80.4% | 95.8% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.24e-01 | 92.9% | 71.4% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.58 | 45.0 | 3.45e-01 | 89.3% | 87.0% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 40.0 | 3.13e-01 | 75.0% | 32.8% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 43.0 | 3.34e-01 | 83.9% | 47.4% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 44.0 | 3.40e-01 | 85.7% | 77.7% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 41.0 | 3.39e-01 | 78.6% | 60.6% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 44.0 | 3.18e-01 | 85.7% | 41.9% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 41.0 | 3.55e-01 | 83.9% | 52.0% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.40e-01 | 87.5% | 60.8% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.55 | 42.0 | 3.90e-01 | 87.5% | 76.3% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 40.0 | 2.54e-01 | 76.8% | 37.2% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 44.0 | 3.19e-01 | 87.5% | 53.1% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 39.0 | 3.51e-01 | 78.6% | 53.2% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.55 | 37.0 | 3.22e-01 | 71.4% | 69.9% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.54 | 42.0 | 3.37e-01 | 85.7% | 91.2% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 41.0 | 3.15e-01 | 83.9% | 99.3% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 39.0 | 3.19e-01 | 80.4% | 93.0% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.68e-01 | 92.9% | 54.0% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.53 | 38.0 | 3.39e-01 | 80.4% | 56.7% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.53 | 44.0 | 4.25e-01 | 98.2% | 85.1% |
| 1wi0A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 41.0 | 3.43e-01 | 92.9% | 83.2% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 40.0 | 3.39e-01 | 91.1% | 95.5% |
| 1w1oA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 40.0 | 3.14e-01 | 85.7% | 81.9% |
| 1iyjB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.21e-01 | 94.6% | 43.7% |
| 3deeA02 | 3.90.930.50 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.52 | 42.0 | 3.41e-01 | 92.9% | 72.8% |
| 1zr6A02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 39.0 | 3.02e-01 | 85.7% | 73.0% |
| 2budA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.20e-01 | 78.6% | 64.1% |
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.90e-01 | 96.4% | 97.1% |
| 2z8lA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 38.0 | 3.22e-01 | 91.1% | 84.6% |
| 5h4eA01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.50 | 39.0 | 2.66e-01 | 89.3% | 78.8% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4383356 | 3615.1.1.49 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Dynamin_N | 0.75 | 57.0 | 3.20e-01 | 82.1% | 8.6% |
| 3712219 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.73 | 50.0 | 4.72e-01 | 71.4% | 81.5% |
| 4958689 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.70 | 48.0 | 4.69e-01 | 75.0% | 66.7% |
| 3398219 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.70 | 50.0 | 4.12e-01 | 75.0% | 70.5% |
| 3447802 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 57.0 | 4.93e-01 | 92.9% | 66.7% |
| 4991999 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.69 | 60.0 | 3.76e-01 | 100.0% | 51.1% |
| 4988225 | 4187.1.1.2 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL | 0.69 | 56.0 | 4.34e-01 | 89.3% | 42.4% |
| 3971321 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.69 | 47.0 | 4.40e-01 | 71.4% | 79.7% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.69 | 49.0 | 4.34e-01 | 75.0% | 63.7% |
| 4280097 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 47.0 | 4.66e-01 | 71.4% | 76.7% |
| 4658938 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.68 | 49.0 | 4.15e-01 | 75.0% | 55.6% |
| 4123180 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.68 | 49.0 | 4.43e-01 | 75.0% | 66.7% |
| 3942510 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.68 | 49.0 | 4.12e-01 | 76.8% | 53.7% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.68 | 46.0 | 5.01e-01 | 71.4% | 93.3% |
| 3603549 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 50.0 | 4.41e-01 | 76.8% | 78.2% |
| 4221708 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 47.0 | 4.38e-01 | 73.2% | 80.0% |
| 3415617 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.68 | 43.0 | 4.51e-01 | 71.4% | 72.0% |
| 5025279 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 54.0 | 4.28e-01 | 87.5% | 69.6% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 46.0 | 4.41e-01 | 71.4% | 76.9% |
| 4397568 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.67 | 51.0 | 4.37e-01 | 82.1% | 56.7% |
| 4499953 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 46.0 | 4.55e-01 | 71.4% | 81.7% |
| 3959849 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 55.0 | 3.92e-01 | 89.3% | 71.2% |
| 4485354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 47.0 | 3.96e-01 | 75.0% | 66.0% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.66 | 48.0 | 4.08e-01 | 76.8% | 87.8% |
| 3734369 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.66 | 54.0 | 3.43e-01 | 91.1% | 45.6% |
| 3783481 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.66 | 52.0 | 4.05e-01 | 85.7% | 68.3% |
| 5013683 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 47.0 | 4.61e-01 | 75.0% | 81.7% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.66 | 46.0 | 5.01e-01 | 75.0% | 93.3% |
| 5050775 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.66 | 49.0 | 4.01e-01 | 82.1% | 81.8% |
| 3282775 | 284.1.1.9 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N | 0.65 | 45.0 | 4.31e-01 | 73.2% | 90.8% |
| 3265148 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.65 | 49.0 | 4.07e-01 | 82.1% | 57.0% |
| 3761259 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.64 | 43.0 | 2.89e-01 | 71.4% | 17.5% |
| 3579295 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.63 | 46.0 | 3.93e-01 | 76.8% | 50.0% |
| 3415780 | 12.5.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › GPS | 0.62 | 48.0 | 3.42e-01 | 89.3% | 56.3% |
| 4363284 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.61 | 46.0 | 3.44e-01 | 80.4% | 75.7% |
| 4464372 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.61 | 47.0 | 4.12e-01 | 87.5% | 83.1% |
| 3977347 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 41.0 | 2.89e-01 | 71.4% | 22.6% |
| 3528111 | 10.21.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 | 0.59 | 48.0 | 3.72e-01 | 89.3% | 76.0% |
| 4144066 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.59 | 45.0 | 3.99e-01 | 87.5% | 62.2% |
| 3400250 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.59 | 39.0 | 4.06e-01 | 71.4% | 78.0% |
| 4943828 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 48.0 | 4.17e-01 | 92.9% | 61.4% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.57 | 47.0 | 2.93e-01 | 91.1% | 16.4% |
| 4295284 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.57 | 38.0 | 3.54e-01 | 80.4% | 52.0% |
| 3630011 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.57 | 47.0 | 3.39e-01 | 100.0% | 60.5% |
| 3954764 | 316.1.1.68 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF28438 | 0.57 | 38.0 | 3.54e-01 | 80.4% | 52.0% |
| 3549615 | 10.32.1.221 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25900 | 0.57 | 47.0 | 3.40e-01 | 92.9% | 37.1% |
| 3957686 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.56 | 44.0 | 3.48e-01 | 85.7% | 83.3% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 45.0 | 3.66e-01 | 89.3% | 65.5% |
| 4532614 | 2.1.1.70 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C | 0.56 | 36.0 | 3.48e-01 | 87.5% | 58.5% |
| 3502962 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.55 | 37.0 | 3.40e-01 | 71.4% | 83.7% |
| 4451993 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 37.0 | 3.69e-01 | 71.4% | 80.0% |
| 5055312 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.54 | 42.0 | 3.23e-01 | 92.9% | 80.0% |
| 4025385 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.54 | 45.0 | 3.18e-01 | 94.6% | 91.1% |
| 3272363 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.53 | 36.0 | 3.17e-01 | 73.2% | 65.3% |
| 1392732 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.53 | 39.0 | 3.25e-01 | 83.9% | 79.1% |
| 3173409 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.53 | 44.0 | 3.73e-01 | 100.0% | 100.0% |
| 3409557 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.52 | 35.0 | 2.40e-01 | 75.0% | 95.4% |
| 4662939 | 1077.1.1.1 ↗ | few secondary structure elements › RelA zinc-finger domain › RelA zinc-finger domain › RelA zinc-finger domain › RelA_RIS | 0.52 | 35.0 | 3.37e-01 | 80.4% | 58.6% |
| 3175589 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.52 | 41.0 | 2.61e-01 | 91.1% | 37.6% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.51 | 33.0 | 2.74e-01 | 87.5% | 36.0% |
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.51 | 40.0 | 3.88e-01 | 96.4% | 95.7% |
| 4174845 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.50 | 36.0 | 2.69e-01 | 82.1% | 58.9% |
D2
high
residues 64-175
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 44.0 | 5.21e-01 | 96.4% | 96.1% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.65 | 39.0 | 4.70e-01 | 91.1% | 93.0% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 35.0 | 4.33e-01 | 89.3% | 92.4% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.61 | 42.0 | 4.60e-01 | 85.7% | 87.6% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 45.0 | 4.25e-01 | 76.8% | 90.4% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 46.0 | 4.22e-01 | 79.5% | 83.9% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 37.0 | 4.07e-01 | 75.0% | 75.8% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.59 | 39.0 | 4.27e-01 | 84.8% | 82.2% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 32.0 | 4.15e-01 | 81.2% | 93.7% |
| 1ml8A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 41.0 | 4.37e-01 | 78.6% | 81.4% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.59 | 48.0 | 4.73e-01 | 95.5% | 81.2% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 46.0 | 4.12e-01 | 92.9% | 58.5% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 46.0 | 4.04e-01 | 85.7% | 65.1% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 46.0 | 4.21e-01 | 93.8% | 63.7% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.58 | 47.0 | 4.92e-01 | 96.4% | 99.0% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 42.0 | 4.06e-01 | 89.3% | 66.4% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.58 | 45.0 | 4.39e-01 | 93.8% | 75.8% |
| 2cm4A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 46.0 | 4.23e-01 | 87.5% | 68.3% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 44.0 | 4.03e-01 | 94.6% | 63.4% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 44.0 | 4.60e-01 | 90.2% | 91.3% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 44.0 | 4.11e-01 | 90.2% | 66.7% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 48.0 | 4.09e-01 | 93.8% | 61.6% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 44.0 | 3.89e-01 | 94.6% | 58.8% |
| 1m61A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 40.0 | 4.14e-01 | 90.2% | 82.7% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 38.0 | 4.21e-01 | 78.6% | 91.0% |
| 1ew3A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.94e-01 | 89.3% | 66.0% |
| 2yt4A03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 32.0 | 3.33e-01 | 83.0% | 60.6% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 42.0 | 3.96e-01 | 90.2% | 68.5% |
| 2l3tA02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 42.0 | 4.44e-01 | 92.9% | 96.0% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 29.0 | 3.69e-01 | 76.8% | 96.7% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.53 | 41.0 | 4.12e-01 | 97.3% | 83.2% |
| 3us4A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 39.0 | 4.12e-01 | 90.2% | 91.8% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 3.54e-01 | 92.0% | 54.3% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.77e-01 | 90.2% | 71.8% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 27.0 | 3.46e-01 | 78.6% | 94.8% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.55e-01 | 91.1% | 56.3% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 4.16e-01 | 92.9% | 93.9% |
| 4bg7A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 27.0 | 2.84e-01 | 78.6% | 54.1% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 41.0 | 3.91e-01 | 89.3% | 94.8% |
| 2dx0A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 43.0 | 4.33e-01 | 96.4% | 96.6% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 38.0 | 4.07e-01 | 94.6% | 95.7% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4544477 | 3369.1.1.2 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › VAS1_LD | 0.67 | 53.0 | 4.95e-01 | 93.8% | 67.1% |
| 3239994 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.63 | 42.0 | 3.12e-01 | 73.2% | 26.3% |
| 3785596 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.63 | 53.0 | 4.70e-01 | 92.0% | 91.5% |
| 3942181 | 6150.1.1.0 ↗ | a+b two layers › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 › hypotheical protein Lreu_0056 | 0.62 | 50.0 | 5.15e-01 | 85.7% | 93.3% |
| 3513651 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.60 | 38.0 | 3.92e-01 | 89.3% | 65.5% |
| 5036065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 39.0 | 4.63e-01 | 97.3% | 100.0% |
| 5051699 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.60 | 47.0 | 4.74e-01 | 92.9% | 83.6% |
| 3280360 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.59 | 48.0 | 4.74e-01 | 95.5% | 80.0% |
| 1292982 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.59 | 46.0 | 4.05e-01 | 92.0% | 54.6% |
| 4977517 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 32.0 | 3.79e-01 | 88.4% | 77.3% |
| 1140833 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.59 | 33.0 | 3.89e-01 | 90.2% | 82.2% |
| 4956970 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.58 | 46.0 | 4.64e-01 | 96.4% | 81.7% |
| 4263663 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 49.0 | 4.35e-01 | 91.1% | 93.8% |
| 4391638 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.58 | 47.0 | 4.55e-01 | 95.5% | 76.0% |
| 6327 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.58 | 46.0 | 4.21e-01 | 93.8% | 63.7% |
| 4026812 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.58 | 46.0 | 4.07e-01 | 92.9% | 58.7% |
| 4471221 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.58 | 46.0 | 4.57e-01 | 95.5% | 79.2% |
| 5061484 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.58 | 46.0 | 4.63e-01 | 95.5% | 83.3% |
| 4992282 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 43.0 | 4.06e-01 | 92.9% | 65.9% |
| 4679715 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.57 | 47.0 | 4.59e-01 | 95.5% | 80.8% |
| 3663339 | 331.4.1.7 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 | 0.57 | 45.0 | 4.01e-01 | 85.7% | 60.0% |
| 3609396 | 883.1.1.20 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_MUG190-like | 0.57 | 43.0 | 3.62e-01 | 81.2% | 81.0% |
| 3202122 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.56 | 50.0 | 3.27e-01 | 100.0% | 57.9% |
| 3329783 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 36.0 | 3.85e-01 | 87.5% | 75.8% |
| 4927080 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.56 | 42.0 | 3.95e-01 | 79.5% | 89.2% |
| 4933596 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.56 | 46.0 | 4.42e-01 | 95.5% | 77.6% |
| 4931257 | 884.1.1.0 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain | 0.56 | 39.0 | 3.92e-01 | 72.3% | 84.2% |
| 3238801 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.55 | 45.0 | 3.02e-01 | 87.5% | 71.9% |
| 3509892 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.55 | 39.0 | 3.37e-01 | 72.3% | 62.3% |
| 144571 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.54 | 44.0 | 3.85e-01 | 94.6% | 57.7% |
| 3403106 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.54 | 44.0 | 3.88e-01 | 92.9% | 59.4% |
| 4668044 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.54 | 43.0 | 4.08e-01 | 84.8% | 78.2% |
| 3895620 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.54 | 44.0 | 3.90e-01 | 93.8% | 59.4% |
| 3960559 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.54 | 40.0 | 3.92e-01 | 91.1% | 70.7% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 45.0 | 4.21e-01 | 91.1% | 95.0% |
| 3769735 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 42.0 | 4.39e-01 | 91.1% | 92.0% |
| 3192363 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.53 | 45.0 | 3.10e-01 | 92.9% | 66.2% |
| 3789706 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 43.0 | 3.78e-01 | 93.8% | 57.6% |
| 4415556 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.53 | 46.0 | 3.79e-01 | 95.5% | 51.0% |
| 4139532 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.53 | 42.0 | 4.01e-01 | 85.7% | 86.7% |
| 3592763 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.53 | 38.0 | 3.21e-01 | 73.2% | 57.9% |
| 5073387 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.53 | 39.0 | 4.18e-01 | 95.5% | 91.6% |
| 4970858 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 40.0 | 4.05e-01 | 83.0% | 80.0% |
| 3973638 | 331.10.1.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase | 0.53 | 46.0 | 3.68e-01 | 95.5% | 46.7% |
| 3967111 | 3338.2.1.2 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin | 0.53 | 40.0 | 3.92e-01 | 92.0% | 72.0% |
| 3283627 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.53 | 41.0 | 3.81e-01 | 95.5% | 63.3% |
| 3619070 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.53 | 42.0 | 3.78e-01 | 93.8% | 59.4% |
| 3330227 | 3270.1.1.0 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase | 0.53 | 37.0 | 3.97e-01 | 90.2% | 90.0% |
| 4226938 | 331.10.1.2 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › AdoMet_dc | 0.52 | 45.0 | 3.60e-01 | 95.5% | 47.6% |
| 3687983 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 42.0 | 3.99e-01 | 91.1% | 74.3% |
| 4950072 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.51 | 41.0 | 3.97e-01 | 84.8% | 87.2% |
| 3808409 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.51 | 42.0 | 3.32e-01 | 90.2% | 50.6% |
| 3248668 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.51 | 32.0 | 3.75e-01 | 76.8% | 90.0% |
| 3273300 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.51 | 37.0 | 4.07e-01 | 84.8% | 96.7% |
D3
high
residues 700-789
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.67 | 55.0 | 5.19e-01 | 90.0% | 84.4% |
| 2byoA00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.66 | 50.0 | 4.01e-01 | 82.2% | 96.7% |
| 3rbyA01 | 2.40.128.320 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain | 0.64 | 45.0 | 3.79e-01 | 72.2% | 87.3% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.62 | 47.0 | 3.67e-01 | 82.2% | 93.8% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.62 | 50.0 | 4.63e-01 | 90.0% | 80.7% |
| 1iucA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.62 | 44.0 | 2.99e-01 | 73.3% | 31.7% |
| 8ainB01 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.61 | 44.0 | 4.19e-01 | 75.6% | 92.4% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 42.0 | 4.68e-01 | 85.6% | 97.0% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.59 | 48.0 | 4.56e-01 | 91.1% | 81.5% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.58 | 45.0 | 4.45e-01 | 83.3% | 85.1% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.56 | 47.0 | 4.26e-01 | 95.6% | 84.1% |
| 2xi9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.35e-01 | 90.0% | 92.5% |
| 4nsxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 3.18e-01 | 96.7% | 50.3% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 48.0 | 3.34e-01 | 96.7% | 50.0% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 46.0 | 4.17e-01 | 96.7% | 90.6% |
| 2kmgA00 | 3.30.70.3580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein | 0.53 | 42.0 | 3.68e-01 | 87.8% | 90.1% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 45.0 | 3.93e-01 | 96.7% | 91.5% |
| 2nlvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.51 | 38.0 | 3.61e-01 | 80.0% | 80.4% |
| 2iiiA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.51 | 40.0 | 3.76e-01 | 88.9% | 75.0% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.72e-01 | 94.4% | 99.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.69 | 47.0 | 4.96e-01 | 86.7% | 78.8% |
| 3223991 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.69 | 48.0 | 3.30e-01 | 73.3% | 56.4% |
| 3807776 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.67 | 47.0 | 3.17e-01 | 73.3% | 24.9% |
| 4027339 | 4041.1.1.0 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase | 0.67 | 45.0 | 3.87e-01 | 70.0% | 70.7% |
| 4971247 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.66 | 45.0 | 4.76e-01 | 85.6% | 78.8% |
| 2361 | 71.1.1.6 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LppX_LprAFG | 0.66 | 50.0 | 4.01e-01 | 82.2% | 96.7% |
| 3613250 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 46.0 | 2.88e-01 | 73.3% | 44.6% |
| 3935730 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.64 | 49.0 | 4.92e-01 | 87.8% | 82.2% |
| 3914877 | 5.1.4.158 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 | 0.64 | 46.0 | 3.00e-01 | 74.4% | 31.7% |
| 4971601 | 241.14.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C | 0.64 | 47.0 | 5.13e-01 | 85.6% | 100.0% |
| 3301296 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.63 | 53.0 | 4.39e-01 | 90.0% | 59.4% |
| 3830511 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.63 | 52.0 | 4.90e-01 | 90.0% | 76.4% |
| 4057882 | 241.2.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay | 0.63 | 51.0 | 4.97e-01 | 90.0% | 88.0% |
| 3829668 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 43.0 | 2.48e-01 | 71.1% | 9.8% |
| 4281428 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.62 | 51.0 | 4.56e-01 | 91.1% | 87.7% |
| 3775139 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.61 | 50.0 | 4.60e-01 | 90.0% | 80.8% |
| 3361876 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.61 | 50.0 | 4.51e-01 | 90.0% | 78.4% |
| 4441678 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.60 | 49.0 | 4.34e-01 | 90.0% | 74.8% |
| 3931696 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.60 | 48.0 | 4.63e-01 | 90.0% | 88.6% |
| 3632693 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.60 | 49.0 | 4.29e-01 | 90.0% | 80.0% |
| 3740110 | 241.4.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 | 0.59 | 48.0 | 4.37e-01 | 88.9% | 79.2% |
| 3727451 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.59 | 48.0 | 4.81e-01 | 90.0% | 96.8% |
| 3192378 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.59 | 43.0 | 4.14e-01 | 77.8% | 94.3% |
| 4016471 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 40.0 | 2.90e-01 | 70.0% | 34.0% |
| 3403936 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.59 | 48.0 | 4.60e-01 | 91.1% | 97.1% |
| 6650 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.59 | 48.0 | 4.21e-01 | 91.1% | 63.3% |
| 3799398 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.58 | 50.0 | 4.21e-01 | 98.9% | 90.3% |
| 4960303 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 40.0 | 3.98e-01 | 71.1% | 93.7% |
| 3220436 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.57 | 48.0 | 4.03e-01 | 95.6% | 78.9% |
| 3743052 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.57 | 41.0 | 2.66e-01 | 75.6% | 42.4% |
| 4072085 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.57 | 43.0 | 2.92e-01 | 100.0% | 20.6% |
| 3788126 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.56 | 45.0 | 4.33e-01 | 91.1% | 77.1% |
| 4943980 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.55 | 44.0 | 3.36e-01 | 88.9% | 51.6% |
| 4096914 | 3822.1.1.1 ↗ | alpha complex topology › Intergenic-region protein › Intergenic-region protein › Intergenic-region protein › Antirestrict | 0.54 | 43.0 | 3.77e-01 | 88.9% | 92.1% |
| 3230503 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 42.0 | 3.29e-01 | 84.4% | 45.3% |
| 3201539 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 3.44e-01 | 98.9% | 90.0% |
D4
medium
residues 319-379_541-616
D5
medium
residues 490-525