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NC_055915.1__YP_010114627.1__KNV73_gp056__00215
Bact-VirNC_055915.1__YP_010114627.1__KNV73_gp056__00215
Identity
- Accession:
- NC_055915 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Taxonomy
TaxID: 2801477
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 80-98_117-164
D2
medium
residues 320-373
Domain cluster:
rep: IMGVR_UViG_2529292698_000003-2529292698-2529621165__D82-134
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mzyA01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.67 | 50.0 | 3.17e-01 | 85.2% | 89.9% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.59 | 41.0 | 3.00e-01 | 75.9% | 24.7% |
| 1hxmB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 38.0 | 2.98e-01 | 94.4% | 29.6% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 44.0 | 3.45e-01 | 88.9% | 86.4% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.55 | 39.0 | 3.38e-01 | 88.9% | 48.2% |
| 3q0hB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.22e-01 | 90.7% | 41.1% |
| 1zq1A02 | 3.40.50.1170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › L-asparaginase, N-terminal domain | 0.51 | 38.0 | 2.65e-01 | 85.2% | 52.7% |
| 1y9kA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 3.29e-01 | 92.6% | 75.2% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025709 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.73 | 45.0 | 4.25e-01 | 92.6% | 50.8% |
| 2754026 | 79.1.1.2 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Hyaluronidase_1 | 0.72 | 43.0 | 2.67e-01 | 94.4% | 11.6% |
| 3166373 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.67 | 43.0 | 3.78e-01 | 96.3% | 43.8% |
| 3879276 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.65 | 45.0 | 3.40e-01 | 74.1% | 33.3% |
| 3914899 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.63 | 37.0 | 2.86e-01 | 74.1% | 24.8% |
| 3840179 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 39.0 | 3.02e-01 | 77.8% | 28.3% |
| 4937333 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.62 | 42.0 | 3.67e-01 | 92.6% | 47.5% |
| 3779151 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.59 | 40.0 | 3.14e-01 | 74.1% | 33.0% |
| 3934912 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 41.0 | 2.92e-01 | 74.1% | 33.5% |
| 4957002 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 36.0 | 3.29e-01 | 90.7% | 45.0% |
| 3563417 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.55 | 42.0 | 3.28e-01 | 90.7% | 75.0% |
| 3479475 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 36.0 | 2.43e-01 | 87.0% | 16.0% |
| 3903501 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.51e-01 | 94.4% | 42.5% |
| 3351287 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.52 | 41.0 | 2.71e-01 | 92.6% | 48.5% |
| 4441857 | 3347.1.1.6 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531, TEN_YD-shell | 0.52 | 40.0 | 2.43e-01 | 87.0% | 17.9% |
| 3881460 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.51 | 44.0 | 3.36e-01 | 96.3% | 40.8% |
| 3964178 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 36.0 | 2.81e-01 | 83.3% | 31.1% |