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NC_055917.2__YP_010114696.1__KNV75_gp05__00005

Bact-Vir

NC_055917.2__YP_010114696.1__KNV75_gp05__00005

Identity

Accession:
NC_055917 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salasmaviridae› Bundooravirus› Bacillus_phage_WhyPhy

TaxID: 2801480

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-58
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20763.3 best UDG-inhib_P56 67.2 1.10e-18 90.2% 86.8%
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.95 82.0 8.14e-01 92.2% 88.7%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.73 62.0 4.36e-01 98.0% 91.0%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.71 53.0 4.10e-01 92.2% 35.6%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.71 53.0 4.50e-01 82.4% 54.0%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.69 57.0 4.64e-01 92.2% 57.3%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 53.0 4.92e-01 88.2% 98.5%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.68 51.0 4.19e-01 82.4% 70.2%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 55.0 4.38e-01 96.1% 54.5%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.67 56.0 4.41e-01 96.1% 60.4%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.66 55.0 4.61e-01 96.1% 91.3%
2vfrA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.66 54.0 3.95e-01 90.2% 34.6%
1i7dA03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.66 53.0 3.98e-01 94.1% 96.5%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 49.0 3.79e-01 96.1% 34.4%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.66 55.0 4.23e-01 96.1% 52.0%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 54.0 4.62e-01 94.1% 57.5%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.66 53.0 4.94e-01 94.1% 74.2%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.66 55.0 4.18e-01 98.0% 51.9%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.66 57.0 4.92e-01 94.1% 96.1%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.66 43.0 4.11e-01 84.3% 57.4%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.66 56.0 4.28e-01 98.0% 54.1%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 55.0 4.00e-01 100.0% 57.1%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.65 56.0 4.96e-01 100.0% 81.6%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.65 52.0 3.77e-01 94.1% 72.8%
4faoC00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.64 53.0 4.70e-01 100.0% 62.7%
1vioA03 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.64 54.0 4.66e-01 96.1% 97.6%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 52.0 4.27e-01 92.2% 49.0%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.64 49.0 4.83e-01 86.3% 83.6%
7r3eB02 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.64 43.0 3.06e-01 70.6% 27.0%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.64 55.0 4.31e-01 100.0% 48.7%
4eq3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 55.0 4.30e-01 98.0% 51.9%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.63 54.0 5.15e-01 100.0% 88.3%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 53.0 4.51e-01 98.0% 57.6%
3pjyA00 2.60.120.1140 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 0.63 47.0 3.60e-01 84.3% 95.3%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.63 50.0 3.96e-01 94.1% 57.1%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 51.0 3.63e-01 94.1% 75.3%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 51.0 4.08e-01 96.1% 58.7%
2ijzA02 2.30.250.10 Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 0.62 49.0 3.96e-01 92.2% 67.3%
1xffA00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.61 49.0 3.31e-01 100.0% 40.3%
2ckaA01 3.40.5.120 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.61 45.0 4.61e-01 84.3% 85.7%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.61 51.0 4.02e-01 98.0% 56.9%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.61 41.0 2.93e-01 70.6% 27.1%
2pnqA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.61 50.0 3.07e-01 100.0% 83.5%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.61 43.0 3.99e-01 100.0% 57.6%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 3.81e-01 98.0% 45.7%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.61 51.0 3.97e-01 96.1% 47.9%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.61 53.0 4.32e-01 100.0% 62.5%
2mvzA00 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.61 50.0 3.68e-01 96.1% 100.0%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 49.0 3.46e-01 90.2% 30.0%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 3.76e-01 96.1% 57.9%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 50.0 3.48e-01 98.0% 37.8%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 50.0 3.77e-01 98.0% 88.9%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 3.52e-01 100.0% 33.0%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 3.69e-01 100.0% 37.0%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.59 47.0 3.96e-01 96.1% 61.2%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 3.79e-01 100.0% 44.4%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 50.0 3.80e-01 100.0% 47.7%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.59 48.0 4.08e-01 98.0% 90.4%
2i02A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 50.0 3.71e-01 100.0% 42.9%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 49.0 4.11e-01 100.0% 97.9%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 48.0 3.30e-01 100.0% 39.2%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 49.0 3.48e-01 94.1% 31.0%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 49.0 3.62e-01 100.0% 42.0%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 47.0 3.55e-01 100.0% 45.0%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 48.0 3.62e-01 98.0% 40.4%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 44.0 3.33e-01 90.2% 35.4%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 46.0 3.77e-01 100.0% 52.3%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.46e-01 100.0% 41.1%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.55e-01 98.0% 47.9%
2v1yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 43.0 3.60e-01 82.4% 91.0%
1w1oA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.57 47.0 3.58e-01 94.1% 37.8%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.42e-01 98.0% 34.6%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 3.76e-01 100.0% 43.2%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.56 46.0 2.90e-01 100.0% 31.9%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 48.0 3.66e-01 100.0% 48.0%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.06e-01 100.0% 60.9%
1r5tA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 43.0 3.31e-01 96.1% 63.1%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.55 43.0 3.66e-01 96.1% 50.5%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 45.0 3.38e-01 98.0% 40.1%
3ijfX00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.53 42.0 3.36e-01 98.0% 64.2%
2j4xA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 40.0 3.30e-01 100.0% 78.2%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 43.0 2.97e-01 92.2% 56.1%
3nyiB01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 3.02e-01 96.1% 79.0%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.44e-01 100.0% 66.7%
4harA00 3.10.50.50 Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein 0.51 39.0 3.20e-01 86.3% 96.9%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
146929 3115.3.1.1 ↗ a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 0.92 79.0 7.68e-01 92.2% 83.9%
3067246 3115.3.1.1 ↗ a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 0.91 80.0 7.75e-01 94.1% 85.7%
3287357 3115.3.1.0 ↗ a+b two layers › GP2-like › P56 › P56 0.81 66.0 6.33e-01 90.2% 96.6%
4990637 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.75 61.0 5.23e-01 92.2% 68.7%
3285401 3986.2.1.0 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.74 64.0 5.69e-01 98.0% 69.3%
3969006 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.74 58.0 6.11e-01 96.1% 100.0%
3803779 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.73 60.0 5.31e-01 92.2% 92.0%
4004704 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.72 57.0 6.03e-01 96.1% 100.0%
3968122 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.72 56.0 5.92e-01 86.3% 97.8%
4016088 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.72 62.0 4.95e-01 100.0% 92.4%
3975705 3115.6.1.0 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.72 58.0 5.86e-01 92.2% 92.0%
2813619 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.71 58.0 3.69e-01 98.0% 17.8%
3216210 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.71 55.0 5.58e-01 88.2% 100.0%
5747 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.70 53.0 5.24e-01 82.4% 87.0%
4007508 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.70 56.0 5.73e-01 90.2% 92.0%
4009311 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.69 53.0 4.98e-01 86.3% 70.8%
3596308 11.1.4.80 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › C2_ITFG1 0.69 61.0 4.35e-01 96.1% 57.9%
5078886 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.69 60.0 4.72e-01 100.0% 47.3%
3170957 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.69 54.0 4.15e-01 86.3% 99.1%
3972526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 4.82e-01 86.3% 95.7%
3942988 4187.2.1.1 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.69 51.0 4.82e-01 84.3% 69.2%
3785832 3792.1.1.2 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.68 49.0 4.06e-01 98.0% 43.3%
3480696 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.68 58.0 4.94e-01 100.0% 57.6%
3388590 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.68 49.0 4.70e-01 100.0% 66.7%
5012895 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.68 53.0 5.26e-01 90.2% 96.4%
2794904 807.1.1.1 ↗ a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.68 54.0 5.04e-01 92.2% 81.8%
3917008 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.67 54.0 4.73e-01 100.0% 58.7%
3340123 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.67 59.0 4.85e-01 98.0% 58.9%
5046850 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.67 59.0 4.91e-01 100.0% 66.7%
4995671 3115.1.1.12 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 0.67 56.0 5.71e-01 100.0% 96.0%
4995672 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.66 53.0 5.37e-01 96.1% 94.0%
4886584 3115.6.1.1 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.66 56.0 5.10e-01 100.0% 78.6%
3923043 4326.1.1.1 ↗ a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.66 55.0 4.51e-01 98.0% 80.0%
3987692 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.65 53.0 4.87e-01 96.1% 68.6%
5061487 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 56.0 4.08e-01 100.0% 35.5%
3414064 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.65 50.0 4.91e-01 100.0% 78.2%
3615237 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.65 53.0 3.30e-01 100.0% 47.2%
4997210 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.65 57.0 4.74e-01 100.0% 64.4%
4463006 3115.2.1.0 ↗ a+b two layers › GP2-like › GP2 › GP2 0.65 49.0 5.12e-01 82.4% 97.8%
4397568 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.65 57.0 4.76e-01 100.0% 64.4%
3888324 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 57.0 4.54e-01 100.0% 58.1%
4425813 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.65 56.0 4.30e-01 100.0% 46.7%
3958897 4187.2.1.0 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.65 52.0 4.12e-01 100.0% 41.7%
3988748 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.64 53.0 3.94e-01 96.1% 38.6%
3400735 379.1.1.3 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.64 48.0 4.73e-01 100.0% 76.4%
4948543 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.64 51.0 4.22e-01 90.2% 57.9%
3595426 228.1.1.0 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C 0.64 55.0 4.37e-01 100.0% 50.9%
4941845 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 50.0 4.93e-01 84.3% 98.1%
3413058 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.64 56.0 4.67e-01 100.0% 67.8%
3413652 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.64 51.0 4.89e-01 100.0% 78.3%
4557537 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.63 56.0 4.65e-01 100.0% 64.4%
4958689 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.63 51.0 4.93e-01 100.0% 80.0%
3704667 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.63 51.0 3.19e-01 98.0% 49.6%
3784003 302.1.1.0 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain 0.63 51.0 3.73e-01 94.1% 57.4%
4478659 3435.1.1.3 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L 0.63 52.0 3.28e-01 100.0% 83.9%
3665041 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.63 51.0 3.93e-01 94.1% 46.4%
3389034 379.1.1.0 ↗ few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.62 47.0 4.69e-01 100.0% 80.0%
4031235 3986.2.1.2 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 0.62 52.0 4.81e-01 100.0% 91.4%
4942796 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.62 50.0 4.04e-01 94.1% 54.5%
4298891 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.62 54.0 3.39e-01 100.0% 30.0%
3501768 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.62 52.0 4.80e-01 100.0% 81.4%
4022609 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.62 52.0 3.86e-01 98.0% 51.0%
3299192 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.62 51.0 4.12e-01 98.0% 54.5%
4259223 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.62 52.0 3.47e-01 100.0% 23.8%
4949578 3957.1.1.0 ↗ a+b two layers › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 › EKC/KEOPS complex subunit GON7 0.62 43.0 4.12e-01 74.5% 95.0%
5041529 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.61 49.0 3.95e-01 94.1% 91.2%
3502194 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.61 53.0 4.35e-01 100.0% 67.4%
5074675 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.61 47.0 3.42e-01 92.2% 95.2%
3957192 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.60 51.0 3.93e-01 98.0% 54.4%
185509 10.26.1.2 ↗ beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › ORF158L-like 0.60 50.0 3.76e-01 96.1% 57.9%
3222254 304.9.1.40 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › BRAP2 0.60 50.0 3.94e-01 100.0% 69.7%
4658432 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.60 52.0 3.88e-01 100.0% 51.1%
3960302 11.1.1.47 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.59 46.0 3.44e-01 100.0% 32.1%
4969409 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.59 50.0 3.90e-01 100.0% 43.5%
4647537 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.59 47.0 3.86e-01 98.0% 50.0%
3766042 221.1.1.76 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.59 49.0 3.90e-01 98.0% 71.8%
3056322 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.59 44.0 3.54e-01 84.3% 67.3%
5016825 10.12.1.31 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_5 0.58 50.0 3.41e-01 94.1% 28.8%
3489385 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 3.71e-01 98.0% 55.2%
3432908 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.57 48.0 2.96e-01 100.0% 98.8%
3404526 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 3.93e-01 98.0% 54.7%
3969586 10.32.1.27 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 0.57 46.0 3.42e-01 94.1% 38.0%
3258675 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.56 47.0 3.53e-01 100.0% 58.6%
3512548 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 45.0 3.10e-01 100.0% 34.4%
5015298 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 47.0 4.80e-01 100.0% 96.0%
4945301 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 37.0 2.78e-01 72.5% 51.3%
3525173 72.1.1.1 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall 0.54 41.0 3.60e-01 96.1% 52.9%
3467990 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.53 45.0 2.54e-01 98.0% 37.1%
3742309 3792.1.1.2 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.51 43.0 3.74e-01 94.1% 82.5%
2529893 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.51 38.0 3.56e-01 88.2% 100.0%