←Back to structures
NC_055919.1__YP_010114825.1__KNV77_gp007__00007
Bact-VirNC_055919.1__YP_010114825.1__KNV77_gp007__00007
Identity
- Accession:
- NC_055919 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Efbeekayvirus›
Klebsiella_phage_vB_KpnP_P184
TaxID: 2806547
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-94
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.66 | 49.0 | 5.27e-01 | 95.7% | 94.7% |
| 2hn1A01 | 3.30.460.20 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like | 0.58 | 41.0 | 3.54e-01 | 95.7% | 47.2% |
| 2mctA00 | 2.60.40.4250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.83e-01 | 80.6% | 89.2% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 34.0 | 3.65e-01 | 94.6% | 81.0% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285401 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.68 | 50.0 | 5.44e-01 | 81.7% | 94.7% |
| 3244285 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.59 | 44.0 | 4.76e-01 | 78.5% | 97.3% |
| 5066941 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 40.0 | 4.36e-01 | 95.7% | 86.7% |
| 3874660 | 2.1.1.131 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_C | 0.53 | 39.0 | 3.21e-01 | 80.6% | 73.5% |
| 3541120 | 2.1.1.131 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_C | 0.52 | 39.0 | 3.60e-01 | 81.7% | 92.0% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 45.0 | 3.19e-01 | 95.7% | 50.2% |