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NC_055919.1__YP_010114832.1__KNV77_gp014__00014
Bact-VirNC_055919.1__YP_010114832.1__KNV77_gp014__00014
Identity
- Accession:
- NC_055919 ↗
- Kingdom:
- phage
Quality
67.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Efbeekayvirus›
Klebsiella_phage_vB_KpnP_P184
TaxID: 2806547
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-89
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 43.0 | 3.87e-01 | 96.9% | 55.9% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.56 | 49.0 | 2.86e-01 | 100.0% | 14.0% |
| 1r8oB01 | 2.30.30.480 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.71e-01 | 70.8% | 89.4% |
| 5iz3A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.52 | 40.0 | 3.07e-01 | 87.7% | 97.1% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 34.0 | 3.77e-01 | 70.8% | 100.0% |
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 31.0 | 3.27e-01 | 84.6% | 68.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3643481 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 44.0 | 2.73e-01 | 70.8% | 51.1% |
| 3011458 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.61 | 44.0 | 3.97e-01 | 96.9% | 53.7% |
| 3700875 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.55 | 47.0 | 3.71e-01 | 96.9% | 81.4% |
| 3628287 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.55 | 44.0 | 2.81e-01 | 90.8% | 24.2% |
| 3710918 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.54 | 39.0 | 2.91e-01 | 80.0% | 42.6% |
| 3864470 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.02e-01 | 98.5% | 67.8% |
| 4592291 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.67e-01 | 100.0% | 95.4% |
| 3793404 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 26.0 | 2.95e-01 | 100.0% | 62.0% |
| 3662991 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 44.0 | 3.83e-01 | 96.9% | 65.0% |
| 3513324 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.51 | 42.0 | 3.71e-01 | 96.9% | 61.0% |
| 3370568 | 4111.1.1.0 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like | 0.51 | 35.0 | 3.03e-01 | 72.3% | 90.5% |
| 3780171 | 6.1.1.4 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin | 0.50 | 45.0 | 3.63e-01 | 100.0% | 80.0% |