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NC_061418.1__YP_010297636.1__MOA67_gp055__00055
Bact-VirNC_061418.1__YP_010297636.1__MOA67_gp055__00055
Identity
- Accession:
- NC_061418 ↗
- Kingdom:
- phage
Quality
52.2
mean pLDDT
Taxonomy
TaxID: 2698923
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-126
D2
high
residues 147-237
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.62 | 46.0 | 4.55e-01 | 90.1% | 76.0% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.59 | 48.0 | 4.85e-01 | 96.7% | 91.0% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 41.0 | 3.00e-01 | 74.7% | 41.3% |
| 3qv0A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.56 | 48.0 | 3.97e-01 | 98.9% | 80.4% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.56 | 25.0 | 3.24e-01 | 78.0% | 82.9% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 47.0 | 4.15e-01 | 97.8% | 87.9% |
| 1euvA02 | 3.30.310.130 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related | 0.54 | 44.0 | 4.27e-01 | 91.2% | 86.7% |
| 4iglB00 | 2.180.10.10 | Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core | 0.53 | 46.0 | 2.82e-01 | 100.0% | 86.2% |
| 1tzlA02 | 3.30.1920.50 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.53 | 29.0 | 3.43e-01 | 71.4% | 79.0% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 37.0 | 3.72e-01 | 92.3% | 72.8% |
| 1xmbA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 45.0 | 3.25e-01 | 97.8% | 73.4% |
| 3looB01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 3.09e-01 | 95.6% | 93.2% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3840029 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.69 | 63.0 | 5.81e-01 | 100.0% | 95.7% |
| 3594393 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.68 | 55.0 | 5.75e-01 | 97.8% | 100.0% |
| 3173631 | 883.1.1.22 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 | 0.66 | 55.0 | 4.16e-01 | 91.2% | 68.8% |
| 184667 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.62 | 46.0 | 4.55e-01 | 90.1% | 76.0% |
| 3280079 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 54.0 | 4.80e-01 | 98.9% | 89.2% |
| 4342847 | 323.1.1.25 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › SIDD_N | 0.61 | 54.0 | 4.30e-01 | 100.0% | 86.5% |
| 4335815 | 292.2.1.14 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › SWIM | 0.60 | 43.0 | 4.65e-01 | 79.1% | 90.7% |
| 3846376 | 233.1.1.0 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain | 0.59 | 51.0 | 4.37e-01 | 100.0% | 94.2% |
| 4569026 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.58 | 41.0 | 3.47e-01 | 73.6% | 91.9% |
| None | — | 0.58 | 40.0 | 2.70e-01 | 71.4% | 39.5% | |
| 4456367 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 49.0 | 4.52e-01 | 97.8% | 76.0% |
| 4635782 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.56 | 48.0 | 4.63e-01 | 100.0% | 83.7% |
| 3940247 | 4099.1.1.1 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD | 0.56 | 43.0 | 4.03e-01 | 85.7% | 72.5% |
| 3595371 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 41.0 | 4.00e-01 | 79.1% | 87.6% |
| 3924724 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.56 | 42.0 | 4.42e-01 | 96.7% | 92.5% |
| 4073600 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.56 | 47.0 | 4.52e-01 | 100.0% | 80.7% |
| 3372166 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.55 | 36.0 | 2.35e-01 | 92.3% | 13.9% |
| 4563102 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.53 | 47.0 | 4.25e-01 | 100.0% | 90.4% |
| 3804431 | 5.1.3.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N | 0.53 | 44.0 | 3.05e-01 | 94.5% | 83.8% |
| 4987228 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 44.0 | 3.63e-01 | 93.4% | 69.2% |
| 3677438 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 43.0 | 3.55e-01 | 92.3% | 82.3% |
| 3337399 | 5.1.2.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › WD40 | 0.52 | 42.0 | 3.84e-01 | 89.0% | 81.6% |
| 4946710 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.51 | 35.0 | 3.80e-01 | 79.1% | 86.7% |
| 3608863 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.50 | 43.0 | 2.78e-01 | 98.9% | 62.8% |
| 3613225 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.50 | 42.0 | 4.05e-01 | 97.8% | 88.2% |
| 4385467 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.50 | 39.0 | 3.76e-01 | 95.6% | 72.7% |