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NC_061421.1__YP_010298664.1__MOC16_gp027__00027

Bact-Vir

Identity

Accession:: NC_061421 ↗
Kingdom:: phage

Quality

85.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Maaswegvirus› Klebsiella_phage_vB_KpM_FBKp24

TaxID: 2801834

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 175-270

PDB

Domain cluster: rep: OR496884.1__WNV45857.1__X__00081__D188-287

CATH (16)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7ocsB01	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.64	56.0	4.64e-01	96.9%	84.4%
2klqA00	1.20.58.870	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.62	41.0	3.92e-01	83.3%	57.9%
2xseA00	1.20.120.1440	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain	0.62	44.0	3.80e-01	76.0%	81.1%
6d2qA02	1.20.80.10	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.61	45.0	4.46e-01	80.2%	73.1%
1t5oA01	1.20.120.420	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1	0.59	48.0	4.28e-01	90.6%	69.5%
3b34A05	1.25.50.10	Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain	0.59	45.0	3.21e-01	84.4%	27.4%
2y8nA00	3.20.70.20	Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain ›	0.58	46.0	2.68e-01	85.4%	28.2%
2bnlC00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.56	44.0	4.01e-01	85.4%	88.1%
2vvwA00	1.10.437.20	Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus	0.56	46.0	4.02e-01	91.7%	73.3%
2c42A03	3.40.920.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III	0.55	50.0	3.85e-01	100.0%	91.0%
3otiA01	3.40.50.2000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B;	0.54	45.0	3.58e-01	96.9%	72.4%
6d3kC02	1.10.510.10	Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1	0.54	41.0	3.44e-01	82.3%	85.9%
4akgA08	1.10.472.130	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain	0.51	40.0	3.47e-01	85.4%	96.8%
3kraC00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	41.0	3.01e-01	86.5%	50.2%
2zcaA00	1.10.520.40	Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › CRISPR-associated protein Cse2	0.51	40.0	3.47e-01	85.4%	71.6%
4b7hA03	1.20.1370.60	Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain ›	0.51	45.0	4.30e-01	100.0%	82.6%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4295547	195.1.1.1 ↗	alpha complex topology › NusB-like › NusB-like › NusB-like › NusB	0.63	45.0	3.97e-01	76.0%	92.4%
3404736	310.2.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF	0.58	47.0	3.65e-01	89.6%	67.6%
5072632	2500.1.1.3 ↗	a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › PFL-like	0.57	44.0	2.63e-01	83.3%	31.4%
3919097	109.4.1.150 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core	0.56	48.0	2.85e-01	100.0%	18.8%
3933727	4953.1.1.0 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like	0.55	36.0	4.08e-01	91.7%	92.9%
4954682	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.54	41.0	4.20e-01	82.3%	93.7%
3811571	5059.1.1.34 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp	0.52	39.0	2.83e-01	83.3%	67.9%
3486540	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	45.0	3.53e-01	100.0%	65.5%
3734899	109.4.1.356 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans	0.52	42.0	2.86e-01	92.7%	51.2%
3411779	109.25.1.7 ↗	alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588	0.51	39.0	3.71e-01	84.4%	86.1%
3307491	109.54.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12	0.50	40.0	3.51e-01	90.6%	58.7%

D2 medium residues 1-160

PDB

Domain cluster: rep: OR413575.1__WNT47070.1__SPLA10_PHROGS00009__00009__D4-165

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5g5gA02	1.10.150.120	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain	0.53	31.0	3.85e-01	79.4%	100.0%
4w6vA00	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.51	41.0	2.93e-01	85.6%	83.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5021529	604.39.1.9 ↗	alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1	0.52	33.0	3.07e-01	75.0%	48.1%