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NC_061421.1__YP_010298671.1__MOC16_gp034__00034

Bact-Vir

NC_061421.1__YP_010298671.1__MOC16_gp034__00034

Identity

Accession:
NC_061421 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-122
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 51.0 5.39e-01 100.0% 94.0%
4r1kB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 56.0 5.00e-01 98.9% 89.0%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.63 56.0 4.36e-01 100.0% 64.0%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 56.0 4.94e-01 100.0% 92.8%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.62 41.0 3.90e-01 97.9% 56.5%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 55.0 4.83e-01 100.0% 90.8%
3f8lB00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.60 46.0 3.86e-01 83.2% 85.0%
1of5B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 51.0 4.72e-01 98.9% 96.1%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.59 52.0 4.59e-01 100.0% 92.4%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 51.0 4.60e-01 100.0% 90.4%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 50.0 4.54e-01 98.9% 96.3%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 4.76e-01 98.9% 96.0%
1na8B00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.58 42.0 3.72e-01 77.9% 71.0%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 50.0 4.66e-01 100.0% 93.6%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 52.0 4.26e-01 100.0% 90.0%
1l7aA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 42.0 2.90e-01 76.8% 30.8%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 51.0 4.41e-01 100.0% 86.5%
4u0wA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.56 44.0 3.74e-01 86.3% 93.4%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 49.0 4.55e-01 98.9% 98.3%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 38.0 3.31e-01 100.0% 43.8%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.56 48.0 4.39e-01 100.0% 97.8%
1g1bA00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.56 43.0 3.69e-01 84.2% 76.8%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 4.70e-01 100.0% 91.0%
3toyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 38.0 3.51e-01 71.6% 92.1%
2nwiB00 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.55 44.0 3.87e-01 90.5% 100.0%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 47.0 3.85e-01 100.0% 79.4%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.55 38.0 3.44e-01 78.9% 51.9%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 47.0 4.28e-01 98.9% 90.0%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 49.0 3.49e-01 100.0% 39.8%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.54 42.0 3.73e-01 86.3% 60.8%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 4.06e-01 98.9% 91.2%
1mmuA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 46.0 3.24e-01 100.0% 44.0%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 4.27e-01 98.9% 95.9%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 4.48e-01 98.9% 98.2%
7dd9A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.53 47.0 3.48e-01 100.0% 49.4%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.09e-01 100.0% 91.5%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.53 47.0 3.91e-01 100.0% 75.9%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.18e-01 97.9% 93.8%
4e72A01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.52 44.0 4.06e-01 93.7% 96.8%
5evhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 45.0 4.24e-01 100.0% 89.3%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.52 44.0 3.73e-01 93.7% 73.0%
2dslA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 36.0 3.40e-01 76.8% 60.0%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 44.0 3.91e-01 100.0% 87.2%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248518 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.67 60.0 5.51e-01 100.0% 77.2%
4523830 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.65 57.0 5.45e-01 98.9% 90.9%
2648443 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 50.0 5.08e-01 100.0% 87.1%
5040360 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 55.0 5.51e-01 93.7% 93.7%
1389718 243.1.1.32 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5104 0.63 56.0 5.00e-01 98.9% 89.0%
3613814 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 56.0 4.93e-01 100.0% 96.4%
3213524 243.1.1.82 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26529 0.62 55.0 4.73e-01 100.0% 91.0%
3277868 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 53.0 4.79e-01 96.8% 97.0%
3201758 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 54.0 4.96e-01 100.0% 90.8%
3791149 5.1.3.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 0.62 53.0 3.53e-01 100.0% 24.4%
3395260 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.62 55.0 3.62e-01 100.0% 33.7%
3957483 243.1.1.77 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 0.61 54.0 4.88e-01 100.0% 92.6%
3455503 243.3.1.12 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI 0.61 48.0 4.86e-01 100.0% 87.4%
3427022 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.61 49.0 4.85e-01 100.0% 84.0%
3627777 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.61 55.0 4.02e-01 96.8% 77.9%
3941903 814.1.1.3 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA 0.61 47.0 4.01e-01 83.2% 89.4%
3580087 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 48.0 3.08e-01 100.0% 16.9%
3995515 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 52.0 3.59e-01 100.0% 28.6%
3951229 243.1.1.77 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF29518 0.60 53.0 4.66e-01 100.0% 85.0%
3265608 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.60 53.0 4.95e-01 100.0% 99.2%
3169231 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.60 52.0 4.62e-01 100.0% 93.8%
3253253 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.59 52.0 4.69e-01 100.0% 91.9%
3666026 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 47.0 4.81e-01 100.0% 93.3%
3729692 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 51.0 4.46e-01 100.0% 91.6%
3268067 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.59 47.0 4.24e-01 87.4% 73.3%
3446982 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.59 52.0 4.64e-01 98.9% 91.1%
3710606 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.59 51.0 4.62e-01 98.9% 90.4%
3277627 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 52.0 4.91e-01 100.0% 90.4%
143958 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.58 51.0 4.60e-01 100.0% 90.4%
3190582 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.58 51.0 4.21e-01 98.9% 88.6%
3407706 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.58 52.0 3.41e-01 100.0% 33.0%
3223708 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 49.0 4.65e-01 97.9% 96.7%
3970741 814.1.1.0 a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase 0.58 44.0 3.86e-01 83.2% 92.7%
4018230 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.58 51.0 4.12e-01 98.9% 78.4%
3466699 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 46.0 4.59e-01 100.0% 85.7%
3732444 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 50.0 4.44e-01 100.0% 89.0%
3785652 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.58 50.0 4.31e-01 100.0% 88.1%
3217508 243.1.1.97 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_N 0.57 50.0 4.65e-01 100.0% 99.2%
3830041 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.57 50.0 4.57e-01 100.0% 89.2%
3705250 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.57 48.0 3.91e-01 91.6% 52.8%
3474450 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.57 51.0 4.67e-01 100.0% 97.6%
3582816 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 49.0 4.49e-01 100.0% 88.8%
4481016 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.57 50.0 4.43e-01 100.0% 93.6%
3470047 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.57 40.0 4.18e-01 90.5% 82.4%
3798282 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 50.0 4.59e-01 100.0% 96.8%
3889571 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.56 49.0 4.57e-01 98.9% 94.3%
3681671 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.56 49.0 4.19e-01 95.8% 93.3%
3600301 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 49.0 4.51e-01 100.0% 99.2%
3230068 243.1.1.85 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 0.56 49.0 4.70e-01 100.0% 97.3%
4870077 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.55 48.0 4.33e-01 100.0% 92.7%
3733248 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.55 48.0 4.12e-01 100.0% 82.5%
3828737 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.55 48.0 4.48e-01 100.0% 100.0%
3976185 243.1.1.55 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TraE 0.54 47.0 4.15e-01 100.0% 79.3%
3262206 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.54 42.0 3.65e-01 86.3% 51.2%
3743138 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.54 47.0 4.52e-01 100.0% 95.7%
3741071 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.54 47.0 4.20e-01 100.0% 85.7%
3173251 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.54 48.0 4.01e-01 100.0% 85.9%
3284019 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 47.0 4.25e-01 100.0% 93.3%
3391128 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.14e-01 100.0% 22.6%
3679001 881.1.1.1 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.54 46.0 3.83e-01 97.9% 55.3%
3487157 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 44.0 2.95e-01 94.7% 21.2%
4020865 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 46.0 3.84e-01 100.0% 71.7%
3229308 243.1.1.85 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 0.53 47.0 4.34e-01 100.0% 84.0%
3948878 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 47.0 4.33e-01 100.0% 96.8%
3962910 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.53 46.0 4.18e-01 100.0% 91.1%
3375375 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.53 47.0 3.27e-01 100.0% 29.8%
4335306 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 45.0 4.19e-01 98.9% 79.2%
4416182 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.52 46.0 4.48e-01 100.0% 91.4%
3270559 883.1.1.6 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N 0.52 42.0 3.63e-01 90.5% 86.9%
4464528 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.52 43.0 4.20e-01 95.8% 99.1%
5072383 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.52 45.0 3.98e-01 100.0% 86.2%
3262201 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 44.0 3.92e-01 100.0% 88.3%
3999618 5.1.4.5 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,CAF1C_H4-bd 0.51 43.0 2.89e-01 95.8% 24.2%
3852438 883.1.1.24 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF29321 0.51 43.0 3.59e-01 98.9% 55.6%
3996829 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.50 41.0 3.91e-01 92.6% 89.6%