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NC_061421.1__YP_010298691.1__MOC16_gp359__00054
Bact-VirNC_061421.1__YP_010298691.1__MOC16_gp359__00054
Identity
- Accession:
- NC_061421 ↗
- Kingdom:
- phage
Quality
70.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Maaswegvirus›
Klebsiella_phage_vB_KpM_FBKp24
TaxID: 2801834
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 98-186
D2
high
residues 194-367
Domain cluster:
rep: hypothetical_protein_MPVG_00172__YP_007676237__Micromonas_pusilla_virus_12T__755272__D21-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 21.3 | 4.50e-04 | 69.0% | 97.0% |
D3
high
residues 373-417
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gb0A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.65 | 48.0 | 2.99e-01 | 80.0% | 64.4% |
| 3b40A02 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.63 | 39.0 | 3.57e-01 | 75.6% | 48.3% |
| 5j72A01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.55 | 37.0 | 2.39e-01 | 93.3% | 16.4% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 40.0 | 2.69e-01 | 84.4% | 21.4% |
| 3kw2B02 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.53 | 40.0 | 2.80e-01 | 86.7% | 90.0% |
| 4k5yA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 45.0 | 2.82e-01 | 97.8% | 37.9% |
| 1yy7A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 37.0 | 2.99e-01 | 97.8% | 37.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5073945 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.59 | 50.0 | 3.32e-01 | 100.0% | 97.6% |
| 5037517 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.58 | 41.0 | 2.69e-01 | 77.8% | 70.4% |
| 4045754 | 110.1.1.18 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1 | 0.58 | 42.0 | 3.29e-01 | 80.0% | 83.8% |
| 4938484 | 2488.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrn_RNA_2 | 0.58 | 50.0 | 3.29e-01 | 100.0% | 98.0% |
| 3995128 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.57 | 44.0 | 2.74e-01 | 82.2% | 23.8% |
| 4974618 | 2006.1.4.54 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › Mut7-C | 0.56 | 45.0 | 3.17e-01 | 100.0% | 30.3% |
| 4358638 | 2488.1.1.12 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › Methyltrans_RNA | 0.50 | 44.0 | 2.98e-01 | 100.0% | 42.8% |
D4
medium
residues 27-83