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NC_061421.1__YP_010298695.1__MOC16_gp355__00058

Bact-Vir

NC_061421.1__YP_010298695.1__MOC16_gp355__00058

Identity

Accession:
NC_061421 ↗
Kingdom:
phage

Quality

65.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 58-109
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.97e-01 100.0% 61.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 6.11e-01 94.2% 71.9%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.43e-01 100.0% 46.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 5.15e-01 88.5% 58.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.13e-01 100.0% 76.9%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 4.57e-01 88.5% 45.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 4.84e-01 88.5% 52.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.63e-01 71.2% 61.9%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.21e-01 88.5% 72.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.61e-01 92.3% 85.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.16e-01 88.5% 75.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.34e-01 92.3% 88.0%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.06e-01 92.3% 79.1%
2ga1A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.48e-01 90.4% 60.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 4.60e-01 86.5% 63.9%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 51.0 4.14e-01 86.5% 63.1%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.99e-01 92.3% 80.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.43e-01 86.5% 61.2%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.65e-01 86.5% 69.8%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 5.04e-01 96.2% 81.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.95e-01 92.3% 81.5%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 53.0 5.13e-01 96.2% 79.7%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 55.0 5.25e-01 100.0% 81.7%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.49e-01 86.5% 66.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.85e-01 92.3% 84.1%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 48.0 4.01e-01 92.3% 45.9%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.63 53.0 4.75e-01 100.0% 67.1%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.19e-01 86.5% 58.3%
4mloA02 1.10.10.1310 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ToxT, HTH1 motif 0.62 45.0 4.69e-01 78.8% 87.2%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.02e-01 86.5% 50.6%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.21e-01 94.2% 55.8%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.20e-01 86.5% 63.6%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.60 44.0 3.72e-01 84.6% 44.8%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.60 54.0 4.10e-01 100.0% 86.3%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 42.0 4.01e-01 76.9% 61.5%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.06e-01 86.5% 69.6%
3jsjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 46.0 3.25e-01 92.3% 36.1%
2b81C00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.58 43.0 2.73e-01 82.7% 39.5%
5k3hB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 53.0 3.84e-01 100.0% 41.4%
2cwqA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.58 48.0 3.72e-01 100.0% 40.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.57 47.0 3.10e-01 100.0% 44.1%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.11e-01 92.3% 80.8%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.51 43.0 3.73e-01 100.0% 60.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.82 70.0 6.72e-01 100.0% 81.7%
4334910 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.82 70.0 5.23e-01 100.0% 39.2%
2448404 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.81 69.0 6.59e-01 100.0% 81.7%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.81 69.0 5.61e-01 100.0% 52.1%
3163613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 72.0 6.48e-01 100.0% 72.9%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.79e-01 98.1% 89.1%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.80 69.0 5.91e-01 100.0% 61.3%
4944862 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 5.88e-01 100.0% 61.3%
2330636 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 63.0 6.31e-01 92.3% 84.9%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.79 68.0 5.97e-01 100.0% 65.3%
3920862 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.78 60.0 6.13e-01 92.3% 90.0%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.77 68.0 5.39e-01 100.0% 49.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 68.0 6.46e-01 100.0% 85.0%
5078377 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 6.25e-01 98.1% 92.0%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 66.0 6.13e-01 98.1% 76.9%
3279913 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 66.0 4.47e-01 100.0% 28.4%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 58.0 5.19e-01 92.3% 58.7%
3795916 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 6.09e-01 84.6% 95.6%
4928270 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.75 57.0 6.04e-01 84.6% 95.6%
3287536 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 55.0 5.84e-01 82.7% 91.1%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.74 60.0 4.80e-01 92.3% 44.8%
3759371 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 64.0 5.39e-01 100.0% 57.3%
3279743 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.74 60.0 5.44e-01 94.2% 67.1%
3913655 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 63.0 5.46e-01 100.0% 62.5%
3970884 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 55.0 4.50e-01 90.4% 44.2%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.73 53.0 5.38e-01 86.5% 82.0%
3922335 101.1.1.221 alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 0.73 61.0 5.01e-01 96.2% 52.5%
3962552 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 54.0 4.82e-01 88.5% 56.0%
3908306 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.73 52.0 5.06e-01 86.5% 68.3%
4995713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 63.0 5.18e-01 100.0% 53.7%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 55.0 5.31e-01 88.5% 73.3%
4102958 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.71 57.0 5.32e-01 92.3% 70.8%
4863786 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.71 56.0 5.55e-01 92.3% 83.6%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 4.85e-01 86.5% 66.7%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.70 50.0 5.44e-01 78.8% 97.5%
3343260 192.15.1.123 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Na_H_Exchanger 0.70 53.0 5.20e-01 96.2% 76.4%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.70 56.0 5.11e-01 94.2% 67.1%
5074438 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 5.25e-01 80.8% 95.0%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.69 55.0 5.40e-01 100.0% 83.6%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.69 46.0 4.74e-01 73.1% 72.0%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.68 51.0 5.09e-01 84.6% 78.2%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 61.0 4.96e-01 100.0% 68.4%
4991127 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.68 56.0 4.45e-01 94.2% 44.5%
4949987 101.1.2.674 alpha arrays › HTH › HTH › winged helix domain › PF29648 0.67 49.0 5.01e-01 86.5% 84.0%
3947727 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 49.0 5.00e-01 78.8% 84.0%
5052144 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 4.53e-01 84.6% 69.1%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.66 52.0 4.88e-01 92.3% 70.8%
5052142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 47.0 5.01e-01 86.5% 88.9%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.66 50.0 5.06e-01 92.3% 90.0%
3944331 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.66 54.0 4.72e-01 92.3% 63.7%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.65 49.0 4.70e-01 84.6% 71.7%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.65 50.0 4.70e-01 98.1% 67.1%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.65 49.0 4.71e-01 98.1% 70.8%
5059633 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.65 48.0 4.72e-01 86.5% 74.5%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.64 55.0 4.56e-01 100.0% 53.7%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 4.25e-01 84.6% 55.0%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.63 49.0 4.72e-01 88.5% 75.0%
3568862 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.63 49.0 4.65e-01 96.2% 72.3%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 50.0 4.81e-01 98.1% 93.3%
1291586 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.60 49.0 3.62e-01 92.3% 45.3%
4929297 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.53 36.0 3.45e-01 76.9% 58.6%