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NC_061443.1__YP_010300693.1__MPK66_gp252__00252

Bact-Vir

NC_061443.1__YP_010300693.1__MPK66_gp252__00252

Identity

Accession:
NC_061443 ↗
Kingdom:
phage

Quality

73.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-37_103-124
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8a93D01 1.10.8.420 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecR Domain 1 0.63 32.0 3.78e-01 78.0% 69.2%
2mabA00 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.63 46.0 3.74e-01 78.0% 45.0%
3kr9A02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 44.0 4.38e-01 86.4% 86.9%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.55 48.0 3.37e-01 98.3% 72.4%
2l37A00 6.10.250.890 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 31.0 3.55e-01 94.9% 76.7%
1gkuB04 3.30.56.120 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 35.0 3.36e-01 98.3% 53.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3718295 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.57 46.0 3.97e-01 88.1% 86.7%
3709726 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 41.0 3.58e-01 91.5% 83.2%
D2 medium residues 38-102
PDB