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NC_061448.1__YP_010302402.1__MPK71_gp280__00280

Bact-Vir

NC_061448.1__YP_010302402.1__MPK71_gp280__00280

Identity

Accession:
NC_061448 ↗
Kingdom:
phage

Quality

72.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alexandravirus› Erwinia_phage_pEa_SNUABM_1

TaxID: 2869543

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-86
PDB
Domain cluster: rep: MH248138.1__AWY08536.1__Alexandra_279__00277__D12-80
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 57.0 6.26e-01 72.4% 85.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 50.0 5.29e-01 71.1% 68.1%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.81 57.0 5.70e-01 73.7% 71.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 51.0 5.49e-01 71.1% 74.2%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 55.0 6.14e-01 71.1% 96.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 51.0 5.45e-01 71.1% 73.5%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 55.0 5.69e-01 77.6% 77.5%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 54.0 5.61e-01 71.1% 84.3%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 54.0 5.55e-01 77.6% 76.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 5.90e-01 77.6% 94.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 48.0 5.52e-01 71.1% 90.7%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 52.0 5.37e-01 71.1% 82.9%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 54.0 5.75e-01 75.0% 93.9%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 52.0 5.64e-01 73.7% 98.4%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.74 52.0 5.65e-01 72.4% 95.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 4.40e-01 72.4% 50.4%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 5.57e-01 73.7% 97.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 51.0 5.64e-01 73.7% 88.7%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 5.75e-01 73.7% 96.7%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 50.0 5.05e-01 71.1% 78.4%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 49.0 5.50e-01 71.1% 100.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 4.85e-01 73.7% 80.6%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 47.0 5.17e-01 71.1% 95.1%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 43.0 4.89e-01 71.1% 89.1%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 47.0 4.94e-01 72.4% 92.6%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.68 40.0 4.73e-01 73.7% 90.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 4.77e-01 81.6% 83.3%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.90e-01 80.3% 79.2%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.52e-01 73.7% 72.5%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.62 43.0 4.60e-01 72.4% 83.3%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 41.0 4.62e-01 73.7% 94.5%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.61 48.0 3.72e-01 86.8% 86.3%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.61 48.0 3.68e-01 88.2% 80.9%
3ng7X01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 40.0 2.90e-01 73.7% 64.7%
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.84e-01 84.2% 79.8%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.53e-01 75.0% 89.1%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 39.0 3.71e-01 98.7% 63.7%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.53 36.0 2.82e-01 71.1% 60.1%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.24e-01 97.4% 91.7%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 2.81e-01 75.0% 52.2%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 37.0 2.43e-01 75.0% 43.3%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 36.0 2.70e-01 76.3% 95.6%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.90 55.0 6.44e-01 75.0% 85.5%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.88 61.0 6.80e-01 71.1% 90.0%
4998870 4.1.1.483 ↗ beta barrels › SH3 › SH3 › SH3 › RRXRR 0.87 54.0 5.17e-01 76.3% 56.5%
3443078 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.85 51.0 3.74e-01 71.1% 26.3%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 62.0 5.17e-01 76.3% 88.3%
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.84 52.0 6.01e-01 76.3% 87.3%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.83 53.0 5.68e-01 71.1% 75.4%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.83 51.0 5.66e-01 71.1% 78.3%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.82 56.0 5.71e-01 71.1% 78.7%
3428486 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 50.0 4.92e-01 71.1% 58.7%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 56.0 5.83e-01 71.1% 84.3%
3243188 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.81 56.0 5.64e-01 71.1% 86.7%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 52.0 5.54e-01 72.4% 74.6%
4241924 4.1.1.93 ↗ beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.81 56.0 5.30e-01 77.6% 61.1%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 55.0 6.10e-01 71.1% 98.3%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.79 52.0 5.28e-01 73.7% 68.0%
3421158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 5.97e-01 73.7% 88.3%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.79 53.0 4.65e-01 77.6% 49.5%
5022848 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 55.0 6.17e-01 77.6% 91.7%
3546309 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.79 54.0 5.47e-01 71.1% 78.7%
3626277 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 54.0 4.96e-01 71.1% 69.5%
3741878 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 53.0 5.74e-01 71.1% 93.8%
3725260 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 54.0 5.58e-01 71.1% 84.3%
3475510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 53.0 5.00e-01 71.1% 87.8%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 54.0 5.62e-01 72.4% 81.4%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 53.0 5.51e-01 71.1% 85.7%
3236054 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 53.0 5.35e-01 71.1% 76.0%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 53.0 5.33e-01 71.1% 76.0%
3915732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 52.0 5.05e-01 71.1% 69.4%
3240651 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 52.0 5.16e-01 71.1% 71.2%
3213114 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 53.0 5.02e-01 72.4% 74.4%
4680114 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 53.0 5.36e-01 72.4% 80.0%
3531894 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.76 52.0 5.59e-01 71.1% 100.0%
5073368 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 54.0 5.59e-01 76.3% 80.0%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 52.0 5.25e-01 71.1% 77.3%
3475462 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.75 59.0 5.65e-01 81.6% 84.7%
3523918 4.1.1.99 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_10 0.75 52.0 5.57e-01 71.1% 83.1%
3482683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.74e-01 71.1% 95.0%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 53.0 5.78e-01 73.7% 90.6%
3787137 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 5.84e-01 86.8% 89.4%
2849853 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 53.0 5.58e-01 73.7% 92.5%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.75 50.0 5.06e-01 72.4% 69.3%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.74 49.0 5.29e-01 75.0% 80.0%
3541996 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.74 54.0 3.98e-01 77.6% 31.6%
403788 4.1.1.100 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_11 0.73 50.0 5.49e-01 71.1% 87.3%
3390253 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 61.0 6.18e-01 92.1% 100.0%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 56.0 5.78e-01 82.9% 97.1%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 4.76e-01 84.2% 59.0%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.71 46.0 4.65e-01 71.1% 66.7%
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 58.0 5.30e-01 89.5% 68.4%
3246255 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 49.0 5.15e-01 72.4% 84.3%
3785385 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.32e-01 89.5% 71.1%
3930643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 47.0 5.28e-01 71.1% 88.3%
3581336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.04e-01 88.2% 79.1%
1031172 4.1.1.113 ↗ beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.70 47.0 4.88e-01 71.1% 73.6%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.69 56.0 5.57e-01 86.8% 90.0%
3706786 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.59e-01 86.8% 85.3%
3855974 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.68 53.0 5.40e-01 82.9% 85.3%
3880508 4.1.1.129 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_5 0.67 56.0 5.24e-01 90.8% 72.6%
4132516 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.67 50.0 4.93e-01 77.6% 78.8%
1545880 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.67 47.0 4.67e-01 73.7% 80.0%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 47.0 4.77e-01 77.6% 76.0%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 49.0 4.99e-01 80.3% 85.3%
3389432 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 5.57e-01 92.1% 97.3%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.63 50.0 5.05e-01 85.5% 96.0%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.62 49.0 4.99e-01 85.5% 93.3%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.58 52.0 3.86e-01 96.1% 48.3%
4327595 4.1.1.402 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2761 0.57 39.0 3.66e-01 71.1% 64.2%