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NC_061449.1__YP_010302499.1__MPK72_gp040__00040

Bact-Vir

Identity

Accession:: NC_061449 ↗
Kingdom:: phage

Quality

72.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alexandravirus› Erwinia_phage_pEa_SNUABM_17

TaxID: 2869545

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 133-200

PDB

D2 medium residues 1-103

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7razA01	3.30.70.100	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.68	48.0	5.21e-01	86.4%	89.4%
3m9qA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.64	44.0	5.14e-01	75.7%	100.0%
4iupA02	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.64	43.0	5.05e-01	70.9%	98.6%
4ac9C04	2.40.10.190	Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4	0.62	35.0	3.91e-01	70.9%	71.2%
2x5cA01	3.30.70.3590	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.56	39.0	4.08e-01	74.8%	81.3%
4ebrA00	3.30.1460.50	Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, ›	0.55	41.0	3.58e-01	78.6%	100.0%
2budA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.55	38.0	4.00e-01	74.8%	80.4%
1zunB02	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.54	39.0	4.13e-01	73.8%	86.7%
3kyfA01	2.30.110.10	Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A	0.53	36.0	3.57e-01	70.9%	91.2%
2yweA02	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.53	38.0	3.86e-01	73.8%	83.0%
2j0nB00	1.20.1710.10	Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like	0.53	43.0	3.57e-01	89.3%	82.4%
3na2A00	3.40.1570.20	Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold ›	0.53	38.0	3.46e-01	75.7%	71.0%
1sb7A02	3.30.2340.10	Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain	0.52	41.0	3.73e-01	88.3%	64.0%
1wb1A02	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.51	36.0	3.81e-01	73.8%	87.0%
4v1ag00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	33.0	2.98e-01	71.8%	45.9%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4930861	4.1.1.13 ↗	beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd	0.72	44.0	5.35e-01	72.8%	98.5%
5025364	4.1.1.13 ↗	beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd	0.68	47.0	5.34e-01	76.7%	97.3%
4029263	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.67	51.0	4.84e-01	80.6%	75.0%
3177842	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.66	56.0	5.32e-01	91.3%	90.8%
3586562	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.66	45.0	4.93e-01	73.8%	85.9%
3725153	4.1.1.286 ↗	beta barrels › SH3 › SH3 › SH3 › DUF7072	0.65	45.0	5.06e-01	76.7%	93.8%
3360171	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.62	55.0	5.02e-01	98.1%	83.3%
3569959	4.2.1.10 ↗	beta barrels › SH3 › SAND › SAND › IRF-2BP1_2_M	0.59	44.0	3.80e-01	76.7%	59.4%
4009799	274.1.1.4 ↗	a+b two layers › Pili subunits › Pili subunits › Pili subunits › T2SSI	0.57	44.0	4.39e-01	91.3%	78.1%
3593976	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	49.0	4.57e-01	95.1%	87.7%
3811908	4111.1.1.2 ↗	a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC	0.56	38.0	3.51e-01	70.9%	67.9%
3713588	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	38.0	4.02e-01	70.9%	96.8%
3460634	4.1.1.25 ↗	beta barrels › SH3 › SH3 › SH3 › PAZ	0.55	38.0	3.52e-01	71.8%	85.0%
3778556	633.23.1.1 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin	0.55	47.0	3.89e-01	93.2%	88.9%
3538582	633.23.1.0 ↗	alpha bundles › Bromodomain-like › Claudin › Claudin	0.51	46.0	3.83e-01	100.0%	77.8%