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NC_061449.1__YP_010302648.1__MPK72_gp189__00189

Bact-Vir

Identity

Accession:: NC_061449 ↗
Kingdom:: phage

Quality

98.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alexandravirus› Erwinia_phage_pEa_SNUABM_17

TaxID: 2869545

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 49-121

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10908.14 best	Tlde1_dom	30.9	4.70e-07	100.0%	37.5%

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2iw2A01	3.40.350.10	Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain	0.56	46.0	3.53e-01	93.2%	70.6%
2fokA03	3.40.91.30	Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease ›	0.54	44.0	3.41e-01	93.2%	94.9%
6lbtA01	2.40.50.810	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.52	41.0	3.40e-01	90.4%	69.7%
3dlaB01	3.60.110.10	Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase	0.51	45.0	2.98e-01	100.0%	67.7%
3pqiA01	2.40.50.230	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain	0.51	37.0	3.64e-01	98.6%	69.5%
1dzfA01	3.40.1340.10	Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain	0.51	40.0	3.33e-01	87.7%	84.1%
4d4rB01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.51	35.0	3.36e-01	74.0%	82.2%
1q8iA03	3.30.420.10	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H	0.50	38.0	2.99e-01	95.9%	34.6%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2724185	4091.1.1.1 ↗	beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD	0.77	68.0	5.35e-01	100.0%	54.5%
1558018	4091.1.1.1 ↗	beta complex topology › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › L,D-transpeptidase catalytic domain-like › YkuD	0.67	60.0	4.93e-01	100.0%	56.2%
3594647	2484.3.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain	0.62	51.0	3.74e-01	94.5%	64.5%
3904743	2008.1.1.86 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP	0.56	46.0	4.06e-01	95.9%	87.8%
4977413	65.1.1.0 ↗	beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases	0.56	36.0	3.93e-01	93.2%	87.3%
4385298	3421.1.1.1 ↗	a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD	0.54	38.0	3.22e-01	74.0%	72.0%
5073524	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.54	44.0	3.63e-01	97.3%	81.9%
3514202	2008.6.1.1 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central	0.52	43.0	3.24e-01	100.0%	92.1%
3175049	63.1.1.4 ↗	beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH_1	0.52	37.0	3.17e-01	78.1%	53.8%
3558197	2484.1.1.34 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1	0.50	41.0	2.95e-01	95.9%	32.7%