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NC_061449.1__YP_010302723.1__MPK72_gp264__00264

Bact-Vir

NC_061449.1__YP_010302723.1__MPK72_gp264__00264

Identity

Accession:
NC_061449 ↗
Kingdom:
phage

Quality

93.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alexandravirus› Erwinia_phage_pEa_SNUABM_17

TaxID: 2869545

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-132
PDB
Domain cluster: rep: KF147891.1__AGS81920.1__PaBG_00036__00036__D9-107
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qwnD01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.63 31.0 3.89e-01 81.5% 80.0%
1cukA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 31.0 3.90e-01 79.0% 83.3%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 32.0 3.79e-01 80.6% 74.7%
1qwyA01 2.40.50.290 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 28.0 3.68e-01 79.0% 88.7%
2id0A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 27.0 3.26e-01 81.5% 65.4%
2je6I02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 31.0 3.54e-01 79.0% 72.7%
4egvA02 2.40.50.840 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 29.0 3.57e-01 79.8% 81.3%
2lssA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 29.0 3.49e-01 80.6% 82.9%
4jpbW02 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.55 30.0 3.60e-01 87.1% 81.0%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.55 27.0 3.54e-01 81.5% 88.9%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 27.0 3.30e-01 70.2% 74.0%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 33.0 3.31e-01 71.0% 60.6%
3ntkB01 2.40.50.790 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 34.0 3.97e-01 100.0% 98.8%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3225328 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 31.0 3.85e-01 78.2% 72.0%
369 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 26.0 3.31e-01 71.0% 60.6%
4442866 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.64 31.0 3.96e-01 78.2% 83.1%
3271235 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 32.0 3.88e-01 71.8% 76.0%
4026894 2.1.1.117 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DPOA2_OB 0.62 32.0 3.20e-01 73.4% 45.4%
3227986 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 32.0 3.76e-01 71.8% 72.5%
4193853 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.61 30.0 3.86e-01 80.6% 84.6%
5006716 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.61 31.0 3.70e-01 94.4% 70.6%
5076905 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.61 30.0 3.40e-01 78.2% 58.9%
4886291 2.1.1.14 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N 0.60 30.0 3.80e-01 79.0% 84.6%
5026160 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 32.0 3.38e-01 80.6% 55.5%
2570782 2.10.1.1 ↗ beta barrels › OB-fold › CheW › CheW › CheW 0.59 27.0 3.51e-01 71.8% 76.1%
4984946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 31.0 3.21e-01 80.6% 51.3%
5029056 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 30.0 3.17e-01 80.6% 51.3%
5058096 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.58 31.0 3.57e-01 80.6% 71.8%
5067243 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 24.0 3.25e-01 81.5% 76.7%
1406655 2.1.1.65 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 0.55 31.0 3.70e-01 80.6% 82.7%
5000512 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.54 33.0 3.62e-01 94.4% 74.0%
3386087 2.1.1.65 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_OB_2 0.54 31.0 3.68e-01 81.5% 85.0%
4932551 2.1.1.11 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.54 31.0 3.59e-01 86.3% 78.9%
5061616 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.51 32.0 3.63e-01 71.0% 84.4%
3616994 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 28.0 3.35e-01 83.9% 80.0%
3799466 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 27.0 3.16e-01 72.6% 74.1%