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NC_061449.1__YP_010302758.1__MPK72_gp299__00299
Bact-VirNC_061449.1__YP_010302758.1__MPK72_gp299__00299
Identity
- Accession:
- NC_061449 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
TaxID: 2869545
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-181
Domain cluster:
rep: Carm_scaffold_0_prodigal-single.1__X__X__00005__D4-137
D2
high
residues 248-311
Domain cluster:
rep: SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00270__D5-61
CATH (89)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 66.0 | 6.40e-01 | 96.9% | 100.0% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 64.0 | 4.87e-01 | 96.9% | 48.3% |
| 4epcA02 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 55.0 | 5.30e-01 | 79.7% | 97.2% |
| 3pieC09 | 2.30.30.750 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 62.0 | 5.32e-01 | 93.8% | 77.8% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 59.0 | 6.24e-01 | 89.1% | 100.0% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 59.0 | 6.14e-01 | 89.1% | 96.6% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.72 | 44.0 | 3.62e-01 | 81.2% | 36.8% |
| 4c5wA01 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.72 | 55.0 | 4.78e-01 | 82.8% | 92.8% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 55.0 | 5.88e-01 | 84.4% | 96.4% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 50.0 | 5.55e-01 | 75.0% | 100.0% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 57.0 | 5.52e-01 | 90.6% | 94.5% |
| 1k3xA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.70 | 56.0 | 4.55e-01 | 89.1% | 69.8% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 54.0 | 5.33e-01 | 90.6% | 78.3% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 54.0 | 5.43e-01 | 84.4% | 87.7% |
| 3a46A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.69 | 55.0 | 4.37e-01 | 89.1% | 69.9% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 53.0 | 5.55e-01 | 84.4% | 91.5% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 4.84e-01 | 89.1% | 59.0% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.69 | 58.0 | 3.93e-01 | 93.8% | 36.8% |
| 1ee8A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.68 | 54.0 | 4.48e-01 | 89.1% | 68.3% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 50.0 | 4.83e-01 | 79.7% | 93.3% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 56.0 | 5.76e-01 | 92.2% | 98.4% |
| 1k82B01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.68 | 54.0 | 4.42e-01 | 90.6% | 71.7% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.48e-01 | 98.4% | 87.5% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.67 | 54.0 | 4.40e-01 | 90.6% | 69.0% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 53.0 | 5.26e-01 | 89.1% | 83.8% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 52.0 | 5.18e-01 | 89.1% | 83.3% |
| 3twlA01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.67 | 53.0 | 4.31e-01 | 89.1% | 70.1% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.67 | 56.0 | 4.34e-01 | 93.8% | 61.4% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 57.0 | 5.34e-01 | 98.4% | 85.2% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 4.91e-01 | 85.9% | 92.1% |
| 3teeA02 | 2.30.30.760 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 51.0 | 4.93e-01 | 84.4% | 76.7% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.66 | 58.0 | 4.05e-01 | 100.0% | 50.5% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.66 | 47.0 | 3.70e-01 | 75.0% | 44.9% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 5.27e-01 | 100.0% | 88.7% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 50.0 | 4.75e-01 | 87.5% | 80.2% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 4.21e-01 | 85.9% | 77.5% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.64 | 43.0 | 4.71e-01 | 82.8% | 95.8% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.64 | 45.0 | 3.61e-01 | 75.0% | 46.8% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 54.0 | 5.26e-01 | 93.8% | 100.0% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 53.0 | 5.12e-01 | 95.3% | 90.5% |
| 2db9A01 | 3.90.70.200 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain | 0.63 | 55.0 | 4.41e-01 | 100.0% | 87.2% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.62 | 52.0 | 3.89e-01 | 95.3% | 63.4% |
| 2ymsC00 | 2.40.10.480 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 48.0 | 4.52e-01 | 81.2% | 76.0% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 46.0 | 4.72e-01 | 79.7% | 100.0% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.62 | 54.0 | 3.49e-01 | 100.0% | 32.9% |
| 4o2wD00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.62 | 48.0 | 2.96e-01 | 82.8% | 23.4% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.61 | 47.0 | 3.37e-01 | 84.4% | 83.1% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 43.0 | 4.27e-01 | 76.6% | 90.0% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 47.0 | 4.27e-01 | 84.4% | 80.5% |
| 1y0gA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.60 | 51.0 | 3.75e-01 | 93.8% | 95.9% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 44.0 | 4.43e-01 | 81.2% | 100.0% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.59 | 48.0 | 4.52e-01 | 89.1% | 94.9% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 3.66e-01 | 89.1% | 50.0% |
| 4jguA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.86e-01 | 81.2% | 81.1% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 44.0 | 4.17e-01 | 84.4% | 79.5% |
| 4a53A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.54e-01 | 85.9% | 90.3% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 42.0 | 4.20e-01 | 82.8% | 88.6% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.57 | 43.0 | 2.57e-01 | 79.7% | 23.8% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.28e-01 | 90.6% | 88.3% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.57 | 40.0 | 4.04e-01 | 79.7% | 72.7% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.57 | 44.0 | 4.50e-01 | 89.1% | 100.0% |
| 2cduA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 48.0 | 3.70e-01 | 96.9% | 98.0% |
| 2b3yA05 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.56 | 46.0 | 3.09e-01 | 89.1% | 83.8% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 43.0 | 4.27e-01 | 87.5% | 100.0% |
| 1gv4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.38e-01 | 90.6% | 97.6% |
| 2vouB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 49.0 | 3.30e-01 | 100.0% | 49.6% |
| 2k0mA00 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 42.0 | 3.70e-01 | 89.1% | 83.7% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.55e-01 | 100.0% | 39.9% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 40.0 | 4.05e-01 | 84.4% | 93.9% |
| 4k22B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.22e-01 | 98.4% | 51.0% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.54 | 44.0 | 2.79e-01 | 98.4% | 80.8% |
| 1xdiA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 48.0 | 3.87e-01 | 98.4% | 71.4% |
| 2v3aA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 47.0 | 3.71e-01 | 100.0% | 95.6% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 3.51e-01 | 89.1% | 93.4% |
| 3o0hB02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 47.0 | 3.87e-01 | 98.4% | 72.6% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 47.0 | 3.46e-01 | 98.4% | 38.7% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.25e-01 | 84.4% | 98.2% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 45.0 | 4.09e-01 | 96.9% | 98.9% |
| 1y13A00 | 3.30.479.10 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD | 0.53 | 46.0 | 3.42e-01 | 96.9% | 63.2% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 47.0 | 2.83e-01 | 100.0% | 19.5% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 46.0 | 3.83e-01 | 98.4% | 73.7% |
| 4iv9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 46.0 | 3.07e-01 | 98.4% | 44.7% |
| 4a9wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 46.0 | 2.92e-01 | 100.0% | 36.4% |
| 2r9zA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 45.0 | 3.71e-01 | 98.4% | 72.9% |
| 2q0lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 46.0 | 3.30e-01 | 100.0% | 55.1% |
| 1w2tA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 42.0 | 3.50e-01 | 100.0% | 82.8% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 40.0 | 3.61e-01 | 84.4% | 64.0% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.88e-01 | 82.8% | 98.2% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 3.33e-01 | 100.0% | 47.1% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 56.0 | 6.45e-01 | 84.4% | 100.0% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.80 | 72.0 | 5.67e-01 | 100.0% | 60.0% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.80 | 73.0 | 5.39e-01 | 100.0% | 48.4% |
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.79 | 72.0 | 6.27e-01 | 100.0% | 72.6% |
| 3798312 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.77 | 67.0 | 6.55e-01 | 95.3% | 97.1% |
| 3935716 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.76 | 68.0 | 6.49e-01 | 100.0% | 97.3% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 67.0 | 6.37e-01 | 100.0% | 96.0% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 67.0 | 5.70e-01 | 96.9% | 66.0% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.75 | 67.0 | 4.98e-01 | 100.0% | 60.0% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.75 | 67.0 | 5.01e-01 | 100.0% | 48.4% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.73 | 66.0 | 5.08e-01 | 100.0% | 55.0% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.73 | 64.0 | 6.05e-01 | 95.3% | 88.0% |
| 3584571 | 4.1.1.56 ↗ | beta barrels › SH3 › SH3 › SH3 › RBB1NT | 0.73 | 58.0 | 3.85e-01 | 90.6% | 23.0% |
| 4327595 | 4.1.1.402 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2761 | 0.73 | 64.0 | 5.68e-01 | 100.0% | 76.8% |
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 64.0 | 5.39e-01 | 96.9% | 62.9% |
| 3587337 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 66.0 | 4.97e-01 | 100.0% | 44.7% |
| 3922903 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.73 | 60.0 | 6.17e-01 | 89.1% | 100.0% |
| 3482360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 59.0 | 5.24e-01 | 87.5% | 91.1% |
| 3501337 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.73 | 61.0 | 5.69e-01 | 92.2% | 97.5% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.72 | 62.0 | 5.93e-01 | 95.3% | 88.0% |
| 3780847 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.72 | 61.0 | 4.62e-01 | 93.8% | 71.3% |
| 2323952 | 4.29.1.1 ↗ | beta barrels › SH3 › Pyrrolysyl-tRNA synthetase tRNA binding domain › Pyrrolysyl-tRNA synthetase tRNA binding domain › PF31240 | 0.72 | 62.0 | 5.62e-01 | 95.3% | 94.2% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.72 | 57.0 | 4.07e-01 | 85.9% | 34.4% |
| 3419491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 58.0 | 6.03e-01 | 89.1% | 100.0% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.71 | 57.0 | 5.95e-01 | 93.8% | 96.6% |
| 4226849 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 61.0 | 5.73e-01 | 98.4% | 86.3% |
| 3558188 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.70 | 59.0 | 5.63e-01 | 92.2% | 78.7% |
| 3855038 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.70 | 55.0 | 4.13e-01 | 87.5% | 35.0% |
| 3484007 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 54.0 | 5.28e-01 | 84.4% | 88.6% |
| 4191690 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.69 | 57.0 | 5.92e-01 | 95.3% | 98.3% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.69 | 53.0 | 5.69e-01 | 82.8% | 100.0% |
| 3834390 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 50.0 | 5.51e-01 | 82.8% | 100.0% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 58.0 | 5.62e-01 | 96.9% | 84.3% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 5.43e-01 | 92.2% | 84.6% |
| 3372243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 59.0 | 5.51e-01 | 96.9% | 87.5% |
| 145285 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.68 | 57.0 | 5.69e-01 | 93.8% | 90.9% |
| 3314585 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.68 | 51.0 | 3.37e-01 | 79.7% | 30.2% |
| 3932647 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.68 | 59.0 | 5.45e-01 | 100.0% | 89.4% |
| 3486496 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 53.0 | 5.65e-01 | 90.6% | 100.0% |
| 3450200 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 54.0 | 4.97e-01 | 89.1% | 68.2% |
| 3706786 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 56.0 | 5.31e-01 | 90.6% | 82.7% |
| 4158712 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 55.0 | 5.35e-01 | 92.2% | 91.4% |
| 3303889 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.67 | 58.0 | 5.55e-01 | 100.0% | 92.0% |
| 3329059 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.67 | 48.0 | 5.23e-01 | 82.8% | 100.0% |
| 3243188 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 54.0 | 5.23e-01 | 93.8% | 98.7% |
| 3616007 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.66 | 53.0 | 5.68e-01 | 85.9% | 100.0% |
| 3421158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 52.0 | 5.40e-01 | 89.1% | 96.7% |
| 3793656 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.66 | 55.0 | 4.37e-01 | 98.4% | 47.6% |
| 3368254 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.66 | 51.0 | 5.37e-01 | 89.1% | 98.2% |
| 4432457 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 57.0 | 5.62e-01 | 100.0% | 98.6% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.66 | 54.0 | 5.62e-01 | 90.6% | 100.0% |
| 4068333 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.66 | 54.0 | 5.43e-01 | 93.8% | 100.0% |
| 3301383 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.65 | 47.0 | 5.17e-01 | 81.2% | 98.0% |
| 4093911 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.65 | 56.0 | 5.36e-01 | 100.0% | 93.3% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.65 | 53.0 | 5.44e-01 | 89.1% | 100.0% |
| 3898952 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 50.0 | 4.87e-01 | 89.1% | 86.7% |
| 3423337 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.64 | 56.0 | 5.24e-01 | 100.0% | 86.3% |
| 3575865 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.64 | 52.0 | 5.16e-01 | 93.8% | 90.0% |
| 2641775 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.64 | 54.0 | 4.35e-01 | 98.4% | 53.0% |
| 3824346 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 55.0 | 5.19e-01 | 100.0% | 86.3% |
| 4213135 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.64 | 54.0 | 4.50e-01 | 100.0% | 56.5% |
| 3834303 | 109.4.1.257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 | 0.64 | 49.0 | 2.99e-01 | 85.9% | 12.1% |
| 3818428 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.63 | 52.0 | 5.03e-01 | 93.8% | 86.7% |
| 3672445 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 53.0 | 4.15e-01 | 96.9% | 83.4% |
| 3676844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.16e-01 | 100.0% | 92.0% |
| 3344796 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 50.0 | 4.64e-01 | 89.1% | 75.9% |
| 3721973 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 50.0 | 4.85e-01 | 92.2% | 89.3% |
| 3476178 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 53.0 | 4.43e-01 | 100.0% | 89.2% |
| 3594413 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 54.0 | 5.08e-01 | 98.4% | 98.8% |
| 4000029 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.62 | 51.0 | 3.18e-01 | 87.5% | 29.2% |
| 3342430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 52.0 | 5.01e-01 | 96.9% | 85.3% |
| 4252954 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.62 | 51.0 | 4.99e-01 | 96.9% | 98.6% |
| 2700914 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.61 | 43.0 | 4.11e-01 | 81.2% | 61.3% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.61 | 49.0 | 4.68e-01 | 89.1% | 80.0% |
| 3967111 | 3338.2.1.2 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin | 0.61 | 49.0 | 4.00e-01 | 90.6% | 85.6% |
| 3784412 | 5.1.4.44 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 | 0.61 | 47.0 | 2.79e-01 | 82.8% | 23.2% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 48.0 | 4.95e-01 | 89.1% | 100.0% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.61 | 47.0 | 4.57e-01 | 89.1% | 78.7% |
| 4302391 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.61 | 48.0 | 4.83e-01 | 90.6% | 98.5% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.92e-01 | 95.3% | 91.4% |
| 3300051 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.60 | 47.0 | 4.55e-01 | 89.1% | 76.0% |
| 3546309 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 47.0 | 4.49e-01 | 87.5% | 85.3% |
| 3222210 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 50.0 | 4.92e-01 | 98.4% | 100.0% |
| 1031172 | 4.1.1.113 ↗ | beta barrels › SH3 › SH3 › SH3 › TraI_2B | 0.60 | 50.0 | 4.87e-01 | 98.4% | 100.0% |
| 4101587 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.60 | 48.0 | 4.27e-01 | 95.3% | 75.2% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 45.0 | 4.42e-01 | 82.8% | 88.6% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.59 | 47.0 | 4.73e-01 | 92.2% | 93.8% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.59 | 48.0 | 4.78e-01 | 92.2% | 92.3% |
| 5028741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 46.0 | 4.84e-01 | 85.9% | 100.0% |
| 4795169 | 5.1.4.404 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IP5PC_F | 0.58 | 48.0 | 3.57e-01 | 89.1% | 45.6% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.64e-01 | 96.9% | 91.4% |
| 3497365 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 42.0 | 4.46e-01 | 81.2% | 100.0% |
| 3936885 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.48e-01 | 89.1% | 93.8% |
| 4940710 | 3174.2.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA | 0.58 | 44.0 | 4.43e-01 | 84.4% | 98.5% |
| 3584738 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 48.0 | 3.44e-01 | 93.8% | 54.9% |
| 3529708 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.57 | 41.0 | 4.02e-01 | 81.2% | 80.0% |
| 3475240 | 4.1.1.304 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O | 0.56 | 42.0 | 4.44e-01 | 85.9% | 100.0% |
| 3028534 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.54 | 48.0 | 3.53e-01 | 100.0% | 84.4% |
| 4323062 | 2003.1.2.99 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, FAD_binding_3 | 0.53 | 47.0 | 2.92e-01 | 98.4% | 36.8% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 37.0 | 3.63e-01 | 79.7% | 78.6% |
D3
medium
residues 182-247
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 51.0 | 5.08e-01 | 97.0% | 80.6% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 40.0 | 3.96e-01 | 75.8% | 64.7% |
| 1lj2A00 | 1.20.5.970 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Nonstructural RNA-binding protein | 0.60 | 40.0 | 3.51e-01 | 77.3% | 43.4% |
| 2iylD01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.56 | 35.0 | 3.58e-01 | 92.4% | 63.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3263473 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.69 | 49.0 | 4.66e-01 | 100.0% | 62.5% |
| 4927753 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.64 | 38.0 | 3.92e-01 | 78.8% | 60.0% |
| 3789705 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.62 | 45.0 | 4.70e-01 | 100.0% | 88.3% |
| 5029951 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 36.0 | 3.68e-01 | 100.0% | 61.5% |
| 3218916 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.59 | 43.0 | 4.44e-01 | 100.0% | 88.3% |
| 3934503 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.58 | 39.0 | 4.24e-01 | 71.2% | 98.0% |
| 3894019 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.57 | 41.0 | 4.31e-01 | 98.5% | 92.7% |
| 4554658 | 632.2.1.16 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › PLDc_N | 0.52 | 40.0 | 3.73e-01 | 84.8% | 71.8% |
| 3800736 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 43.0 | 2.86e-01 | 98.5% | 85.2% |