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NC_061450.1__YP_010303059.1__MPK73_gp270__00270
Bact-VirNC_061450.1__YP_010303059.1__MPK73_gp270__00270
Identity
- Accession:
- NC_061450 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Taxonomy
TaxID: 2797313
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-104
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gszA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.74 | 35.0 | 3.57e-01 | 100.0% | 45.1% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 38.0 | 3.45e-01 | 100.0% | 41.6% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 38.0 | 3.42e-01 | 100.0% | 41.6% |
| 3pdiA02 | 3.40.50.12380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase MoFe cofactor biosynthesis protein NifE, C-terminal | 0.58 | 49.0 | 3.63e-01 | 94.0% | 85.3% |
| 3efzB00 | 1.20.190.20 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain | 0.58 | 40.0 | 3.05e-01 | 70.0% | 40.4% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 4.00e-01 | 90.0% | 57.4% |
| 3w1oA00 | 3.40.1760.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › | 0.55 | 47.0 | 4.52e-01 | 96.0% | 99.1% |
| 7wj9A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 36.0 | 2.62e-01 | 71.0% | 53.8% |
| 3tefA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 45.0 | 3.80e-01 | 96.0% | 81.7% |
| 3a0oA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.52 | 45.0 | 3.03e-01 | 92.0% | 40.3% |
| 5fbhA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 36.0 | 2.63e-01 | 93.0% | 25.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3319356 | 650.1.1.5 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › CPP1-like | 0.67 | 42.0 | 5.03e-01 | 80.0% | 96.9% |
| 3838699 | 3783.1.1.0 ↗ | alpha bundles › Toxin RnlA C-terminal domain › Toxin RnlA C-terminal domain › Toxin RnlA C-terminal domain | 0.65 | 48.0 | 3.93e-01 | 78.0% | 50.8% |
| 3913593 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 34.0 | 3.72e-01 | 100.0% | 64.7% |
| 3327308 | 109.4.1.1742 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_CPL3 | 0.60 | 43.0 | 4.01e-01 | 82.0% | 61.7% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.59 | 46.0 | 3.37e-01 | 84.0% | 67.0% |
| 3924217 | 304.48.1.24 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 | 0.56 | 49.0 | 3.57e-01 | 93.0% | 90.4% |
| 3635157 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.55 | 39.0 | 2.99e-01 | 73.0% | 90.8% |
| 4600913 | 158.1.1.0 ↗ | alpha bundles › Lipoxygenase › Lipoxygenase › Lipoxygenase | 0.54 | 47.0 | 2.94e-01 | 95.0% | 51.5% |
| 3315301 | 109.2.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_47 | 0.52 | 42.0 | 2.94e-01 | 87.0% | 38.8% |
| 3512736 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.52 | 25.0 | 3.25e-01 | 100.0% | 81.8% |
| 3916303 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 38.0 | 2.66e-01 | 78.0% | 77.4% |
| 3627573 | 192.17.1.10 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › eIF-3c_N | 0.51 | 40.0 | 3.89e-01 | 86.0% | 78.3% |
| 3769234 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.50 | 31.0 | 3.74e-01 | 100.0% | 96.9% |