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NC_061451.1__YP_010303215.1__MPK74_gp074__00074
Bact-VirNC_061451.1__YP_010303215.1__MPK74_gp074__00074
Identity
- Accession:
- NC_061451 ↗
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Taxonomy
TaxID: 2866695
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-124
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 26.0 | 3.06e-01 | 74.1% | 57.9% |
| 4ii2A02 | 3.40.50.12550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ubiquitin-activating enzyme E1, inactive adenylation domain, subdomain 2 | 0.56 | 43.0 | 3.47e-01 | 96.4% | 41.5% |
| 1iq3A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 34.0 | 3.51e-01 | 85.7% | 62.7% |
| 2jrmA00 | 1.10.10.620 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ribosome modulation factor like domain | 0.54 | 24.0 | 3.08e-01 | 84.8% | 71.7% |
| 6cy5A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 32.0 | 3.50e-01 | 84.8% | 73.0% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 4.00e-01 | 93.8% | 86.4% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.50 | 38.0 | 3.42e-01 | 78.6% | 90.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3294701 | 3755.3.1.371 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Chloroplast_duf | 0.55 | 45.0 | 4.27e-01 | 87.5% | 80.0% |
| 4960039 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.54 | 43.0 | 3.19e-01 | 86.6% | 78.7% |
| 4953633 | 3745.1.1.1 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex | 0.54 | 43.0 | 3.21e-01 | 87.5% | 75.1% |
| 4030141 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.54 | 40.0 | 4.08e-01 | 84.8% | 79.1% |
| 3415024 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 46.0 | 3.37e-01 | 100.0% | 57.5% |