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NC_061451.1__YP_010303321.1__MPK74_gp180__00180

Bact-Vir

NC_061451.1__YP_010303321.1__MPK74_gp180__00180

Identity

Accession:
NC_061451 ↗
Kingdom:
phage

Quality

51.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-103
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5dvwA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 41.0 3.56e-01 78.3% 61.4%
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 47.0 4.36e-01 98.8% 80.6%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 39.0 4.03e-01 84.3% 78.5%
2zxrA02 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.55 41.0 3.12e-01 83.1% 44.3%
1z7mC00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 39.0 2.69e-01 77.1% 24.8%
2a0bA00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.51 39.0 3.55e-01 86.7% 59.3%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.51 40.0 3.37e-01 88.0% 96.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3457663 192.29.1.178 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28703 0.57 41.0 3.80e-01 74.7% 82.9%
3822871 108.1.1.23 alpha arrays › EF-hand › EF-hand-related › EF-hand › RST 0.57 37.0 4.13e-01 72.3% 91.7%
4580867 601.3.1.14 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PF27870 0.53 41.0 3.82e-01 85.5% 66.7%
5077398 1075.5.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MatE 0.53 43.0 3.31e-01 94.0% 83.3%
3380503 109.1.1.6 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.52 38.0 2.89e-01 79.5% 71.2%
D2 high residues 301-414
PDB
D3 medium residues 190-294
PDB