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NC_061451.1__YP_010303323.1__MPK74_gp182__00182
Bact-VirNC_061451.1__YP_010303323.1__MPK74_gp182__00182
Identity
- Accession:
- NC_061451 ↗
- Kingdom:
- phage
Quality
82.6
mean pLDDT
Taxonomy
TaxID: 2866695
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-76
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.80 | 67.0 | 5.32e-01 | 98.3% | 47.0% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 61.0 | 5.17e-01 | 100.0% | 55.6% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 59.0 | 4.85e-01 | 96.6% | 50.0% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 59.0 | 5.10e-01 | 100.0% | 56.7% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 59.0 | 4.83e-01 | 98.3% | 47.8% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 59.0 | 5.07e-01 | 96.6% | 57.4% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.72 | 61.0 | 5.90e-01 | 100.0% | 85.1% |
| 2n7zA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.69 | 49.0 | 4.02e-01 | 100.0% | 41.5% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 56.0 | 4.74e-01 | 100.0% | 55.3% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.67 | 59.0 | 5.43e-01 | 100.0% | 81.6% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 57.0 | 4.92e-01 | 100.0% | 60.4% |
| 1bcrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.67 | 50.0 | 3.24e-01 | 100.0% | 18.5% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.66 | 55.0 | 4.84e-01 | 100.0% | 68.8% |
| 1c3cA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.64 | 54.0 | 4.75e-01 | 100.0% | 71.4% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.63 | 55.0 | 4.84e-01 | 100.0% | 73.6% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.63 | 55.0 | 4.78e-01 | 100.0% | 74.7% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.63 | 54.0 | 4.67e-01 | 100.0% | 74.0% |
| 7drjB01 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.63 | 54.0 | 3.88e-01 | 100.0% | 49.2% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 54.0 | 4.80e-01 | 100.0% | 72.9% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.61 | 53.0 | 3.28e-01 | 98.3% | 20.5% |
| 3c8tA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.60 | 49.0 | 4.32e-01 | 100.0% | 67.0% |
| 1v8oH00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.59 | 48.0 | 3.66e-01 | 89.7% | 64.7% |
| 2j5oA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 35.0 | 3.44e-01 | 84.5% | 52.3% |
| 2yi9A05 | 1.20.1270.270 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain | 0.59 | 42.0 | 3.91e-01 | 91.4% | 58.4% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.58 | 49.0 | 3.80e-01 | 100.0% | 73.8% |
| 2juaA00 | 1.20.1480.30 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Designed four-helix bundle protein | 0.57 | 46.0 | 3.88e-01 | 91.4% | 86.3% |
| 2ifaB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 46.0 | 3.19e-01 | 91.4% | 56.2% |
| 4unfA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.56 | 45.0 | 3.70e-01 | 93.1% | 82.1% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.56 | 48.0 | 4.63e-01 | 100.0% | 89.7% |
| 1n5uA04 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 49.0 | 4.31e-01 | 100.0% | 84.9% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 46.0 | 3.00e-01 | 98.3% | 93.5% |
| 3e3rA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 49.0 | 4.13e-01 | 100.0% | 99.0% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.55 | 45.0 | 3.65e-01 | 100.0% | 58.5% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 36.0 | 3.53e-01 | 100.0% | 60.9% |
| 2yfqB01 | 1.10.8.1210 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 37.0 | 3.87e-01 | 100.0% | 82.7% |
| 2hpsA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 44.0 | 3.17e-01 | 96.6% | 42.4% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.52 | 43.0 | 4.00e-01 | 96.6% | 78.9% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.74 | 61.0 | 4.68e-01 | 100.0% | 39.3% |
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 64.0 | 5.11e-01 | 98.3% | 60.0% |
| 3163820 | 101.1.2.185 ↗ | alpha arrays › HTH › HTH › winged helix domain › RecD_N | 0.73 | 57.0 | 4.42e-01 | 94.8% | 39.2% |
| 4071670 | 3361.1.1.0 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 | 0.73 | 61.0 | 6.08e-01 | 100.0% | 93.3% |
| 4290275 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.71 | 62.0 | 5.04e-01 | 100.0% | 62.7% |
| 4561725 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.70 | 60.0 | 5.02e-01 | 100.0% | 65.7% |
| 3651184 | 4957.1.1.7 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › MOM1 | 0.69 | 58.0 | 5.45e-01 | 100.0% | 77.3% |
| 4114241 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.68 | 58.0 | 4.95e-01 | 100.0% | 66.0% |
| 4073103 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.67 | 57.0 | 4.66e-01 | 100.0% | 57.4% |
| 3499902 | 181.1.1.12 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SCAF11-like_C | 0.67 | 59.0 | 5.48e-01 | 100.0% | 78.4% |
| 3365581 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.67 | 56.0 | 4.62e-01 | 100.0% | 57.4% |
| 4081945 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.67 | 56.0 | 4.60e-01 | 100.0% | 56.5% |
| 3442783 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.66 | 59.0 | 4.78e-01 | 100.0% | 58.2% |
| 3372157 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 57.0 | 5.09e-01 | 100.0% | 76.5% |
| 5048677 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 53.0 | 4.22e-01 | 100.0% | 42.3% |
| 4457905 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.65 | 54.0 | 4.68e-01 | 100.0% | 66.0% |
| 4251398 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.65 | 59.0 | 4.79e-01 | 100.0% | 67.6% |
| 4489811 | 103.17.1.0 ↗ | alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain | 0.65 | 48.0 | 5.07e-01 | 100.0% | 96.0% |
| 5025553 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.65 | 56.0 | 4.75e-01 | 100.0% | 65.0% |
| 3431604 | 3758.1.1.0 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins | 0.65 | 55.0 | 3.48e-01 | 100.0% | 18.2% |
| 5007379 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.64 | 57.0 | 4.77e-01 | 100.0% | 60.0% |
| 4976222 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.64 | 53.0 | 4.46e-01 | 100.0% | 60.0% |
| 3714475 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.64 | 56.0 | 5.34e-01 | 100.0% | 85.7% |
| 3709879 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.64 | 56.0 | 5.19e-01 | 100.0% | 85.3% |
| 3271988 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 55.0 | 5.17e-01 | 100.0% | 83.6% |
| 4933446 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.63 | 56.0 | 4.68e-01 | 100.0% | 60.0% |
| 4964445 | 4049.1.1.0 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like | 0.63 | 51.0 | 5.14e-01 | 100.0% | 95.0% |
| 2793781 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.63 | 54.0 | 3.87e-01 | 100.0% | 48.4% |
| 4630813 | 4952.1.1.0 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like | 0.62 | 52.0 | 4.35e-01 | 100.0% | 59.1% |
| 4566276 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.61 | 51.0 | 3.03e-01 | 100.0% | 12.2% |
| 4927047 | 632.19.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A | 0.60 | 52.0 | 4.84e-01 | 100.0% | 89.3% |
| 4040148 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.58 | 46.0 | 3.96e-01 | 91.4% | 80.0% |
| 3822747 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 45.0 | 3.80e-01 | 86.2% | 68.0% |
| 4999519 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.58 | 47.0 | 3.23e-01 | 100.0% | 23.7% |
| 3506967 | 632.1.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C | 0.58 | 50.0 | 4.34e-01 | 96.6% | 83.3% |
| 3800925 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.55 | 40.0 | 3.50e-01 | 81.0% | 77.9% |
| 3620818 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.55 | 40.0 | 3.48e-01 | 81.0% | 77.9% |
| 3656439 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.54 | 45.0 | 2.75e-01 | 100.0% | 82.2% |
| 4937297 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.54 | 47.0 | 3.95e-01 | 100.0% | 67.0% |