Back to structures

NC_061451.1__YP_010303378.1__MPK74_gp237__00237

Bact-Vir

NC_061451.1__YP_010303378.1__MPK74_gp237__00237

Identity

Accession:
NC_061451 ↗
Kingdom:
phage

Quality

60.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-68
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cllA01 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.75 65.0 4.29e-01 100.0% 30.5%
3r5gA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.74 65.0 4.31e-01 100.0% 40.0%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.73 51.0 3.47e-01 73.5% 33.9%
2w01B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.73 63.0 4.22e-01 100.0% 38.1%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.73 62.0 4.22e-01 100.0% 37.4%
5oyhD00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.71 60.0 4.10e-01 100.0% 38.4%
3cxjA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.71 59.0 4.31e-01 98.0% 50.0%
2f1fA02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.70 57.0 4.96e-01 93.9% 64.1%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.70 48.0 4.09e-01 71.4% 43.9%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 57.0 4.92e-01 100.0% 61.2%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 60.0 5.15e-01 100.0% 72.5%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.69 57.0 4.93e-01 100.0% 71.8%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.69 57.0 4.94e-01 95.9% 63.7%
2x3lA01 3.90.1150.150 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.68 58.0 4.51e-01 93.9% 77.1%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.68 58.0 4.69e-01 98.0% 61.6%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.68 57.0 4.74e-01 100.0% 55.3%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 40.0 3.66e-01 93.9% 45.5%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 4.68e-01 100.0% 61.3%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.66 54.0 4.21e-01 100.0% 44.3%
6n8eA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.65 50.0 3.52e-01 87.8% 69.8%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.65 57.0 3.73e-01 98.0% 70.3%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.65 52.0 4.69e-01 91.8% 88.9%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.65 44.0 3.92e-01 73.5% 48.1%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 54.0 4.42e-01 100.0% 58.2%
2yvwA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.64 54.0 3.57e-01 95.9% 25.2%
1usmA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.64 50.0 4.45e-01 91.8% 71.4%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 4.72e-01 100.0% 71.0%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.64 50.0 4.53e-01 87.8% 70.6%
3d8kD00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.64 50.0 3.02e-01 87.8% 30.9%
4jndA02 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.63 50.0 3.09e-01 85.7% 19.1%
4p72A04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.63 51.0 4.48e-01 91.8% 73.7%
3pcoB04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.63 49.0 4.35e-01 87.8% 66.7%
3b46A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 51.0 3.59e-01 93.9% 62.1%
1bgxT05 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 50.0 3.89e-01 100.0% 39.3%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 48.0 4.39e-01 93.9% 77.1%
5b7sB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 52.0 3.76e-01 95.9% 69.6%
3rq1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 47.0 3.29e-01 85.7% 47.1%
1v2dA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 53.0 3.88e-01 100.0% 55.2%
4alzA03 3.30.70.1770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 48.0 4.56e-01 100.0% 76.6%
4trkA00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.59 47.0 3.16e-01 100.0% 74.0%
1o4sA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.59 50.0 3.55e-01 95.9% 53.0%
3h5xA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.58 49.0 3.77e-01 95.9% 56.9%
4r5zA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 45.0 3.51e-01 93.9% 38.1%
1darA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 3.19e-01 100.0% 21.3%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.51e-01 79.6% 48.3%
2o1bA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 49.0 3.47e-01 95.9% 56.0%
3p1tA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 50.0 3.73e-01 98.0% 62.3%
4aimA03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 43.0 4.02e-01 93.9% 74.6%
3getA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 49.0 4.04e-01 100.0% 73.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.44e-01 98.0% 70.0%
3kdgA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.56 43.0 3.68e-01 93.9% 58.5%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 39.0 3.48e-01 79.6% 46.4%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 3.20e-01 89.8% 90.5%
3cq4A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 48.0 3.59e-01 98.0% 57.8%
1sqgA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.55 45.0 4.30e-01 91.8% 86.2%
2c1iA02 3.90.640.30 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.55 43.0 3.75e-01 87.8% 62.3%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.29e-01 79.6% 41.5%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.54 42.0 3.64e-01 93.9% 61.8%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.54 40.0 3.45e-01 79.6% 73.5%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.28e-01 79.6% 45.7%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.40e-01 85.7% 51.1%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.53 43.0 3.17e-01 91.8% 32.6%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.52 44.0 3.41e-01 98.0% 44.5%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.51 37.0 3.64e-01 87.8% 76.4%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4932536 304.19.1.0 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain 0.78 67.0 5.66e-01 100.0% 67.1%
4978506 3714.1.1.0 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.74 64.0 4.32e-01 100.0% 38.9%
3972594 3714.1.1.1 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.73 64.0 4.04e-01 100.0% 27.8%
4977732 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.73 65.0 4.15e-01 100.0% 24.8%
5059020 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.72 49.0 4.21e-01 71.4% 45.0%
4952130 3714.1.1.1 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › LonC_helical 0.72 63.0 4.04e-01 100.0% 31.7%
4976626 3714.1.1.0 a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.72 63.0 4.08e-01 100.0% 32.4%
4435772 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.71 60.0 4.54e-01 95.9% 43.1%
1918436 6051.5.1.1 alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 3 N-terminal docking domain › Class 3 N-terminal docking domain › TubC_N 0.71 56.0 5.29e-01 89.8% 72.9%
5027998 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.71 48.0 3.99e-01 71.4% 40.0%
4977215 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.70 58.0 5.49e-01 95.9% 78.3%
4309637 1036.1.1.1 a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 0.70 57.0 4.84e-01 93.9% 58.3%
4990794 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.70 60.0 4.75e-01 100.0% 55.2%
3989542 2484.1.1.269 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_4 0.69 48.0 3.81e-01 75.5% 35.2%
3885541 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.68 59.0 5.40e-01 100.0% 75.4%
5074169 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.67 54.0 4.21e-01 95.9% 84.2%
4605419 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.67 58.0 4.92e-01 98.0% 75.0%
4826122 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.67 56.0 4.23e-01 100.0% 41.1%
3789594 859.1.1.0 a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.67 57.0 3.74e-01 100.0% 54.3%
4003744 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.67 56.0 3.09e-01 100.0% 15.3%
1290736 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.67 56.0 4.95e-01 95.9% 71.6%
5040129 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.67 57.0 4.68e-01 100.0% 57.9%
3988793 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.66 48.0 4.09e-01 89.8% 44.4%
3621974 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.66 52.0 4.69e-01 93.9% 66.7%
4640904 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.66 45.0 3.83e-01 71.4% 42.4%
5032696 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.66 45.0 3.89e-01 71.4% 45.0%
4598614 304.48.1.22 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III 0.65 54.0 4.23e-01 100.0% 44.2%
4978280 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.65 55.0 4.73e-01 100.0% 76.2%
3839951 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.65 51.0 5.27e-01 89.8% 95.6%
5069565 304.26.1.0 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like 0.65 56.0 4.57e-01 100.0% 60.0%
4988179 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 51.0 4.77e-01 93.9% 78.1%
4033471 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.65 54.0 4.47e-01 98.0% 60.0%
5026253 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.64 43.0 3.78e-01 71.4% 45.0%
4529153 327.19.1.1 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C 0.64 47.0 4.25e-01 81.6% 68.6%
4644238 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.64 52.0 4.39e-01 91.8% 64.7%
4025349 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.64 43.0 3.17e-01 71.4% 30.8%
4945822 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.63 50.0 3.82e-01 91.8% 38.4%
4375524 2006.1.1.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP 0.63 48.0 3.17e-01 89.8% 25.7%
3252054 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.63 51.0 3.20e-01 91.8% 24.6%
4636695 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.63 51.0 4.66e-01 100.0% 67.6%
2122949 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.62 49.0 3.20e-01 91.8% 20.1%
5029986 3261.1.1.0 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.62 48.0 4.73e-01 91.8% 90.9%
4970952 3715.1.1.1 a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal_L22e 0.61 50.0 4.35e-01 100.0% 85.9%
4957119 304.8.1.114 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF2102 0.60 50.0 4.33e-01 93.9% 63.7%
4058430 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.60 47.0 4.39e-01 89.8% 70.8%
4025595 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 47.0 4.42e-01 93.9% 81.5%
3535695 1021.1.1.2 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.60 51.0 4.22e-01 100.0% 98.9%
5058358 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.60 42.0 3.68e-01 79.6% 51.8%
3511397 5067.1.1.3 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.60 51.0 3.31e-01 100.0% 59.6%
5001157 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.60 50.0 4.31e-01 100.0% 84.7%
5065439 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.60 50.0 3.44e-01 91.8% 88.5%
3414623 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.60 48.0 2.98e-01 93.9% 14.9%
3894383 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 47.0 4.59e-01 93.9% 81.8%
5065987 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.58 49.0 4.19e-01 100.0% 61.2%
3806737 5057.1.1.0 alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.58 49.0 3.64e-01 100.0% 35.7%
3911302 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.58 48.0 4.49e-01 100.0% 83.1%
3204533 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.57 44.0 4.00e-01 91.8% 68.0%
5004095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.57 40.0 3.54e-01 81.6% 47.1%
4437948 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 43.0 4.00e-01 95.9% 64.3%
5027113 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.58e-01 79.6% 51.2%
4416214 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.56 43.0 3.77e-01 91.8% 57.6%
4967809 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.56 39.0 3.66e-01 79.6% 58.6%
4968322 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.56 46.0 4.49e-01 100.0% 87.3%
3387583 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.55 49.0 3.40e-01 98.0% 88.1%
5046059 327.11.2.83 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C 0.55 42.0 4.17e-01 100.0% 83.6%
3669363 11.1.1.389 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.55 45.0 3.37e-01 93.9% 95.4%
5057532 101.1.2.893 alpha arrays › HTH › HTH › winged helix domain › DUF2226 0.53 36.0 2.35e-01 75.5% 13.4%
5038398 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.53 35.0 3.24e-01 71.4% 46.7%
4973217 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.26e-01 79.6% 49.4%
184685 6051.5.1.1 alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 3 N-terminal docking domain › Class 3 N-terminal docking domain › TubC_N 0.53 37.0 3.35e-01 79.6% 50.0%
4201723 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.52 42.0 4.20e-01 100.0% 100.0%
5031012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.20e-01 87.8% 46.7%
4456406 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 45.0 3.64e-01 98.0% 56.8%
5037873 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.52 38.0 3.47e-01 91.8% 56.2%
5046019 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.51 34.0 2.97e-01 81.6% 40.5%
5009323 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 37.0 2.81e-01 85.7% 29.9%
4928469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 3.75e-01 98.0% 60.0%
3616709 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.51 39.0 3.46e-01 98.0% 86.7%
4992529 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.26e-01 85.7% 51.1%