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NC_061451.1__YP_010303451.1__MPK74_gp310__00310
Bact-VirNC_061451.1__YP_010303451.1__MPK74_gp310__00310
Identity
- Accession:
- NC_061451 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Taxonomy
TaxID: 2866695
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-103
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.60 | 34.0 | 4.17e-01 | 77.0% | 90.7% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 53.0 | 3.61e-01 | 100.0% | 87.3% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 50.0 | 3.35e-01 | 96.6% | 95.9% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.51e-01 | 70.1% | 93.8% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.57 | 36.0 | 2.51e-01 | 90.8% | 17.9% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 36.0 | 4.21e-01 | 81.6% | 90.3% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 41.0 | 4.30e-01 | 77.0% | 87.7% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 43.0 | 3.75e-01 | 82.8% | 74.8% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 34.0 | 4.06e-01 | 78.2% | 93.3% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 3.25e-01 | 98.9% | 93.3% |
| 5yy8A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 40.0 | 2.86e-01 | 80.5% | 62.9% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.53 | 47.0 | 4.23e-01 | 100.0% | 87.0% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.53 | 40.0 | 3.81e-01 | 86.2% | 67.3% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.52 | 45.0 | 3.17e-01 | 100.0% | 86.0% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.52 | 45.0 | 3.52e-01 | 100.0% | 78.6% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 40.0 | 3.75e-01 | 86.2% | 66.4% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 45.0 | 4.12e-01 | 98.9% | 90.1% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 30.0 | 3.34e-01 | 97.7% | 73.1% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 45.0 | 3.28e-01 | 100.0% | 97.6% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 37.0 | 2.61e-01 | 80.5% | 50.5% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 36.0 | 3.84e-01 | 81.6% | 83.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702818 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 53.0 | 3.65e-01 | 100.0% | 95.4% |
| 3442715 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.57 | 51.0 | 3.49e-01 | 100.0% | 94.0% |
| 185622 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.55 | 43.0 | 3.70e-01 | 82.8% | 72.1% |
| 3763497 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 36.0 | 3.88e-01 | 81.6% | 84.0% |
| 4015427 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 40.0 | 2.97e-01 | 82.8% | 86.0% |
| 4927532 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.51 | 39.0 | 3.51e-01 | 83.9% | 84.8% |
| 3245798 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.39e-01 | 97.7% | 37.7% |