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NC_062581.1__YP_010347894.1__MZD04_gp345__00345

Bact-Vir

NC_062581.1__YP_010347894.1__MZD04_gp345__00345

Identity

Accession:
NC_062581 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Tepukevirus› Pseudomonas_phage_Psa21

TaxID: 2530023

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 67-180
PDB
Domain cluster: rep: IMGVR_UViG_3300006894_000039-3300006894-Ga0079215_1000005620__D114-216
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01145.32 best Band_7 27.4 4.30e-06 100.0% 54.8%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vhqU01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.85 73.0 7.43e-01 100.0% 93.6%
1winA01 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.84 76.0 7.58e-01 100.0% 94.0%
2rpbA00 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.78 64.0 6.50e-01 100.0% 89.4%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.75 68.0 6.86e-01 100.0% 98.2%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.72 30.0 4.51e-01 99.1% 95.7%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.64 48.0 3.79e-01 98.2% 36.8%
1bcoA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 48.0 3.90e-01 93.9% 89.6%
1x9mA03 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 48.0 4.17e-01 94.7% 84.3%
5f1mA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 48.0 3.74e-01 97.4% 87.8%
3gd6A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.54 40.0 3.78e-01 100.0% 64.1%
8in8C01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 40.0 3.11e-01 100.0% 34.4%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.53 33.0 2.80e-01 100.0% 36.0%
2q2eB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 36.0 2.96e-01 74.6% 91.0%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3312228 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.90 78.0 7.33e-01 100.0% 77.0%
3599340 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.89 77.0 7.24e-01 100.0% 77.0%
3605179 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.89 77.0 6.68e-01 100.0% 63.0%
3597939 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.86 73.0 6.98e-01 100.0% 78.5%
5058343 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.86 77.0 7.43e-01 100.0% 85.6%
3959591 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.86 72.0 7.26e-01 100.0% 87.8%
4932838 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 72.0 7.10e-01 100.0% 84.2%
3260338 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 72.0 6.97e-01 100.0% 80.8%
3269095 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 70.0 6.78e-01 98.2% 78.4%
4946531 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.85 76.0 7.40e-01 100.0% 87.2%
3700069 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 72.0 7.26e-01 100.0% 88.7%
3974085 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 72.0 7.05e-01 100.0% 84.2%
3500570 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 71.0 6.44e-01 100.0% 67.3%
5010097 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.85 76.0 7.60e-01 100.0% 94.8%
3523996 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 7.12e-01 100.0% 87.8%
5001545 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 6.67e-01 100.0% 74.8%
5069131 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 6.75e-01 100.0% 77.7%
4649099 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 72.0 6.51e-01 100.0% 68.7%
3602552 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 6.29e-01 100.0% 65.2%
4947843 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.84 75.0 7.30e-01 100.0% 87.2%
3386432 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 80.0 6.91e-01 100.0% 77.0%
4995673 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.84 71.0 6.96e-01 100.0% 84.2%
3227676 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.18e-01 100.0% 63.1%
3700023 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.95e-01 100.0% 85.0%
3237534 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 7.02e-01 100.0% 87.8%
3355174 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 71.0 6.96e-01 100.0% 85.0%
3732337 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.66e-01 100.0% 77.7%
3333427 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 5.95e-01 100.0% 56.7%
3496975 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.83 70.0 6.66e-01 100.0% 77.7%
3289226 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 75.0 7.50e-01 100.0% 94.8%
3569209 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.99e-01 100.0% 87.8%
5054379 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.66e-01 100.0% 77.7%
3883427 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 69.0 6.06e-01 100.0% 61.2%
4977988 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 69.0 6.53e-01 100.0% 74.8%
3998793 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 76.0 6.68e-01 100.0% 69.4%
4944483 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 69.0 6.63e-01 100.0% 77.7%
5050182 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 74.0 6.20e-01 100.0% 58.9%
4941790 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 70.0 6.48e-01 100.0% 72.9%
4927252 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.83 71.0 6.63e-01 100.0% 76.3%
4991921 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 69.0 6.02e-01 100.0% 61.2%
3482847 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.82 76.0 7.33e-01 100.0% 88.8%
4490995 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 75.0 5.59e-01 100.0% 41.9%
4956270 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 78.0 6.65e-01 100.0% 75.9%
3728098 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 77.0 6.94e-01 100.0% 84.7%
3487126 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.82 71.0 6.64e-01 100.0% 77.0%
3840749 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 69.0 6.88e-01 100.0% 87.8%
4942649 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.82 62.0 6.49e-01 100.0% 85.7%
5054328 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.82 62.0 6.76e-01 100.0% 94.7%
5059432 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.82 74.0 7.26e-01 100.0% 90.8%
5064380 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.82 62.0 6.65e-01 100.0% 90.9%
5062790 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.81 62.0 6.18e-01 100.0% 78.3%
4670893 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 76.0 7.04e-01 100.0% 82.9%
4940518 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.81 62.0 6.71e-01 100.0% 94.7%
4970323 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 75.0 7.27e-01 100.0% 91.2%
4009220 3860.1.1.0 ↗ alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.81 76.0 5.28e-01 100.0% 34.5%
3976795 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.81 76.0 7.11e-01 100.0% 85.2%
5059138 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.81 75.0 7.26e-01 100.0% 95.2%
4944893 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.80 72.0 6.88e-01 100.0% 83.8%
5070793 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.80 61.0 6.58e-01 100.0% 94.7%
5028381 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 69.0 6.54e-01 100.0% 77.8%
5012808 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.80 71.0 6.46e-01 100.0% 72.7%
5081221 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.80 60.0 6.29e-01 100.0% 85.7%
4196175 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.80 60.0 6.26e-01 100.0% 85.7%
5037408 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.79 60.0 6.25e-01 100.0% 85.7%
5000634 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.79 61.0 5.99e-01 100.0% 75.8%
5028291 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.79 60.0 6.55e-01 100.0% 94.7%
5058702 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.79 73.0 6.91e-01 100.0% 85.2%
4949238 239.5.1.1 ↗ beta barrels › Ribosomal protein L25-like › 40S ribosomal protein S3A N-terminal domain › 40S ribosomal protein S3A N-terminal domain › Ribosomal_S3Ae 0.79 60.0 5.15e-01 100.0% 52.0%
5035388 230.5.1.4 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.79 73.0 6.81e-01 100.0% 82.9%
5053511 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.79 60.0 6.22e-01 100.0% 85.7%
3970222 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.79 74.0 7.13e-01 100.0% 92.8%
4946601 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.79 73.0 7.16e-01 100.0% 95.0%
4937873 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.78 59.0 6.44e-01 100.0% 95.7%
4600902 230.6.1.0 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain 0.78 59.0 6.17e-01 100.0% 85.7%
5055024 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.78 59.0 6.44e-01 100.0% 94.7%
4988943 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.78 59.0 6.03e-01 100.0% 81.8%
4984761 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.78 59.0 6.39e-01 100.0% 94.7%
4025984 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.78 73.0 7.19e-01 100.0% 95.0%
5027891 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.78 59.0 6.34e-01 100.0% 94.7%
4960853 230.5.1.4 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.78 72.0 6.69e-01 100.0% 85.7%
5046273 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.77 58.0 5.89e-01 100.0% 78.9%
4979692 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.77 70.0 6.69e-01 100.0% 86.2%
5060336 230.5.1.4 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.77 69.0 6.52e-01 97.4% 86.7%
4983144 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.76 59.0 6.18e-01 100.0% 88.6%
3278458 230.5.1.4 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7_1 0.76 70.0 6.51e-01 100.0% 87.9%
4460725 230.6.1.1 ↗ a+b two layers › T-fold › 40S ribosomal protein S3A C-terminal domain › 40S ribosomal protein S3A C-terminal domain › Ribosomal_S3Ae 0.76 58.0 6.32e-01 100.0% 96.8%
4996557 230.5.1.1 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › Band_7 0.76 68.0 6.80e-01 100.0% 96.5%
3719141 230.5.1.2 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.74 68.0 5.11e-01 100.0% 43.4%
3599357 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.74 68.0 6.71e-01 99.1% 100.0%
3531258 230.5.1.2 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.74 68.0 6.38e-01 99.1% 91.9%
3501639 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.73 65.0 6.19e-01 100.0% 83.1%
3595900 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.73 68.0 4.98e-01 100.0% 40.4%
3718698 230.5.1.2 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder 0.73 67.0 4.90e-01 100.0% 39.0%
3623034 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.51 36.0 3.13e-01 100.0% 44.7%
D2 medium residues 188-285
PDB
Domain cluster: representative