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NC_062743.1__YP_010356454.1__M1M21_gp16__00016
Bact-VirNC_062743.1__YP_010356454.1__M1M21_gp16__00016
Identity
- Accession:
- NC_062743 ↗
- Kingdom:
- phage
Quality
83.2
mean pLDDT
Taxonomy
TaxID: 2743803
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-73
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fmgG00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.81 | 53.0 | 3.41e-01 | 100.0% | 15.5% |
| 6muwB00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.80 | 53.0 | 3.34e-01 | 100.0% | 14.8% |
| 4lg3A02 | 6.10.20.130 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.74 | 52.0 | 5.49e-01 | 78.0% | 86.0% |
| 3v9rA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.72 | 57.0 | 4.82e-01 | 94.0% | 52.3% |
| 3pntA01 | 1.10.10.1660 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nicotine adenine dinucleotide glycohydrolase, helical linker domain | 0.53 | 37.0 | 3.38e-01 | 78.0% | 54.7% |
| 7jt8I02 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.51 | 44.0 | 3.16e-01 | 96.0% | 63.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2724319 | 3747.1.1.1 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod | 0.74 | 51.0 | 5.00e-01 | 76.0% | 66.7% |
| 3715946 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 50.0 | 3.76e-01 | 82.0% | 45.6% |
| 4979784 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.66 | 50.0 | 3.24e-01 | 84.0% | 20.0% |
| 3587711 | 142.1.1.10 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › HTH_16 | 0.65 | 48.0 | 4.59e-01 | 86.0% | 69.8% |
| 5059555 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.60 | 51.0 | 2.99e-01 | 100.0% | 12.3% |
| 3695371 | 7516.1.1.26 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 | 0.59 | 48.0 | 2.75e-01 | 98.0% | 48.8% |
| 3724512 | 148.1.1.21 ↗ | alpha arrays › Histone-like › Histone-related › Histone › SAGA-Tad1 | 0.58 | 52.0 | 4.05e-01 | 100.0% | 49.5% |
| 3222455 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.52 | 46.0 | 2.95e-01 | 100.0% | 26.4% |