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NC_062743.1__YP_010356502.1__M1M21_gp46__00064

Bact-Vir

NC_062743.1__YP_010356502.1__M1M21_gp46__00064

Identity

Accession:
NC_062743 ↗
Kingdom:
phage

Quality

89.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-82
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00166.27 best Cpn10 41.1 2.00e-10 100.0% 89.2%
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6mrc100 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.83 77.0 6.95e-01 100.0% 85.0%
1p3hB00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.76 71.0 6.42e-01 100.0% 87.8%
1g31A00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.76 70.0 6.15e-01 100.0% 88.8%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 44.0 4.92e-01 97.4% 91.4%
1wlyA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.65 57.0 4.31e-01 100.0% 41.7%
1cdoA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.63 59.0 4.05e-01 100.0% 53.8%
2vcyA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.63 58.0 4.33e-01 100.0% 45.0%
5dovB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.63 58.0 4.20e-01 100.0% 44.7%
1n9gA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.63 58.0 4.13e-01 100.0% 43.5%
3twoB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.19e-01 100.0% 59.5%
2vn8A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 58.0 4.34e-01 100.0% 55.4%
3uogA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 58.0 4.17e-01 100.0% 52.8%
4gi2B01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 58.0 3.88e-01 100.0% 42.1%
3fbgA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.21e-01 100.0% 41.8%
3gazA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.36e-01 100.0% 52.1%
2x49A02 3.40.5.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 0.62 34.0 4.03e-01 100.0% 83.3%
1qorA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.23e-01 100.0% 43.9%
3qwbA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.18e-01 100.0% 41.6%
1jqbA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.62 57.0 4.04e-01 100.0% 52.1%
4dvjB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.61 57.0 4.11e-01 100.0% 41.3%
4jbgA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.61 56.0 4.09e-01 100.0% 53.8%
4a27A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.61 56.0 4.37e-01 100.0% 50.0%
5a3vB01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.61 56.0 4.17e-01 100.0% 46.7%
3b70A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.60 55.0 4.21e-01 100.0% 50.3%
4dupA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.60 55.0 4.07e-01 100.0% 42.8%
3gmsA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.60 54.0 3.92e-01 100.0% 39.0%
2j8zA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.59 54.0 4.02e-01 100.0% 43.0%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 34.0 3.56e-01 84.2% 61.8%
4ilkA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.58 53.0 3.88e-01 100.0% 52.0%
3gohA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.58 52.0 3.92e-01 100.0% 43.3%
3m7nA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 45.0 4.33e-01 100.0% 79.1%
1xweA01 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 47.0 3.88e-01 100.0% 53.8%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.09e-01 97.4% 31.0%
3slkA02 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 41.0 2.79e-01 100.0% 21.4%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4173931 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.88 83.0 7.60e-01 100.0% 89.5%
3359945 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.87 81.0 7.39e-01 100.0% 81.4%
3938500 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.85 78.0 7.34e-01 98.7% 93.3%
4182470 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.83 77.0 7.16e-01 100.0% 89.4%
4082853 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.83 78.0 7.20e-01 100.0% 89.4%
3594024 236.1.2.0 beta barrels › GroES-like › GroES-related › GroES 0.81 76.0 7.09e-01 100.0% 88.9%
3674955 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.79 66.0 6.46e-01 100.0% 82.5%
4417276 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.77 71.0 6.42e-01 100.0% 91.0%
4029028 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.76 71.0 6.38e-01 100.0% 86.0%
2794379 236.1.2.1 beta barrels › GroES-like › GroES-related › GroES › Cpn10 0.73 65.0 6.08e-01 100.0% 84.2%
4012930 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.71 57.0 4.64e-01 100.0% 48.1%
4030636 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.68 58.0 3.76e-01 100.0% 22.6%
4951886 3174.4.1.0 beta barrels › Ribosomal protein L14-like › Hypothetical protein NegoA.19184.a N-terminal domain › Hypothetical protein NegoA.19184.a N-terminal domain 0.68 46.0 4.34e-01 98.7% 58.9%
3686467 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.65 58.0 4.34e-01 100.0% 41.7%
158351 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.65 57.0 5.14e-01 100.0% 70.9%
5075226 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 59.0 4.67e-01 100.0% 57.4%
4948062 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.64 59.0 4.54e-01 100.0% 65.6%
4309167 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 57.0 4.24e-01 100.0% 40.6%
3886963 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 60.0 4.24e-01 100.0% 42.9%
4053749 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 57.0 4.31e-01 100.0% 42.9%
4126814 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 59.0 4.43e-01 100.0% 47.4%
3504197 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 59.0 4.49e-01 100.0% 49.1%
4064998 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.64 57.0 4.29e-01 100.0% 42.9%
4387469 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 59.0 4.34e-01 100.0% 43.2%
3954789 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.63 57.0 3.63e-01 100.0% 22.1%
4626189 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 59.0 4.70e-01 100.0% 90.0%
4018424 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.63 59.0 4.52e-01 100.0% 47.5%
4487318 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 58.0 4.36e-01 100.0% 44.1%
4167077 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.63 57.0 4.31e-01 100.0% 44.2%
3179941 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 58.0 4.31e-01 100.0% 56.5%
5018104 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.63 58.0 3.67e-01 100.0% 31.5%
4329192 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.63 58.0 4.22e-01 100.0% 39.5%
4522678 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 59.0 4.53e-01 100.0% 51.6%
4972077 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 58.0 4.43e-01 100.0% 63.0%
4980341 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.63 58.0 4.34e-01 100.0% 62.1%
3461033 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.63 58.0 4.50e-01 100.0% 51.0%
3435718 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 58.0 4.97e-01 100.0% 68.7%
None 0.62 57.0 3.64e-01 100.0% 22.8%
1511324 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.62 58.0 4.72e-01 100.0% 72.4%
3257072 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.35e-01 100.0% 59.4%
2741513 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.62 58.0 4.94e-01 100.0% 68.1%
5020601 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.62 57.0 4.20e-01 98.7% 61.1%
3697246 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 58.0 4.21e-01 100.0% 45.0%
4020035 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.62 57.0 4.06e-01 100.0% 59.1%
3191496 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.31e-01 100.0% 58.6%
3949555 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 56.0 4.77e-01 98.7% 63.5%
3996506 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 58.0 4.68e-01 100.0% 71.9%
3928654 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 56.0 4.44e-01 100.0% 52.6%
3735367 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 56.0 4.23e-01 100.0% 66.1%
4068091 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.32e-01 100.0% 45.3%
3286331 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 56.0 5.52e-01 97.4% 100.0%
3693991 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.33e-01 100.0% 50.6%
3457826 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.85e-01 98.7% 71.3%
3210869 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.25e-01 100.0% 46.7%
3511722 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.62 57.0 4.21e-01 100.0% 51.9%
3550777 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.62 57.0 3.61e-01 100.0% 22.6%
4963067 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.62 57.0 4.44e-01 100.0% 52.9%
3599543 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.61 57.0 4.53e-01 98.7% 55.0%
3949453 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.61 57.0 4.38e-01 100.0% 50.0%
1063658 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.61 56.0 4.59e-01 100.0% 78.7%
3828161 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.61 56.0 4.35e-01 100.0% 50.0%
3260836 2003.1.1.232 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_N 0.61 57.0 3.91e-01 100.0% 33.8%
4299738 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.61 54.0 4.39e-01 96.1% 55.0%
3946675 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.61 56.0 4.34e-01 100.0% 53.1%
3962851 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.61 56.0 4.34e-01 100.0% 52.5%
3212056 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 42.0 4.20e-01 98.7% 70.0%
3726115 236.1.1.4 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_zinc_N_2 0.60 56.0 4.43e-01 100.0% 53.8%
4023456 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.60 55.0 4.31e-01 98.7% 51.3%
3476684 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.60 55.0 4.16e-01 100.0% 48.8%
3206542 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.60 54.0 4.45e-01 97.4% 74.6%
3688377 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.59 54.0 4.35e-01 98.7% 55.0%
3282739 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.59 54.0 3.76e-01 100.0% 33.6%
3958248 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.59 52.0 4.41e-01 96.1% 64.2%
3594384 236.1.1.0 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain 0.58 51.0 4.15e-01 96.1% 56.4%
3281966 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.57 52.0 3.98e-01 100.0% 53.8%
3290901 236.1.1.2 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 0.57 51.0 3.82e-01 100.0% 44.2%
3427044 4.1.1.36 beta barrels › SH3 › SH3 › SH3 › FeThRed_A 0.57 38.0 3.59e-01 75.0% 57.8%
3289228 236.1.1.1 beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.51 44.0 3.61e-01 100.0% 52.9%